If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl, making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was successful.
Last evaluation was ago and took 4 minutes, 48 seconds.
Resolving package versions...
Installed Missings ───────────── v0.4.3
Installed DataAPI ────────────── v1.1.0
Installed NearestNeighbors ───── v0.4.4
Installed WorldOceanAtlasTools ─ v0.3.3
Installed MbedTLS ────────────── v0.7.0
Installed CFTime ─────────────── v0.0.3
Installed BinaryProvider ─────── v0.5.8
Installed StatsBase ──────────── v0.32.0
Installed Conda ──────────────── v1.3.0
Installed Reexport ───────────── v0.2.0
Installed DataDeps ───────────── v0.7.1
Installed OceanGrids ─────────── v0.1.3
Installed Compat ─────────────── v2.2.0
Installed OrderedCollections ─── v1.1.0
Installed URIParser ──────────── v0.4.0
Installed CondaBinDeps ───────── v0.1.0
Installed IniFile ────────────── v0.5.0
Installed Parsers ────────────── v0.3.10
Installed DataStructures ─────── v0.17.6
Installed Match ──────────────── v1.0.2
Installed HTTP ───────────────── v0.8.8
Installed SortingAlgorithms ──── v0.3.1
Installed NCDatasets ─────────── v0.9.5
Installed JSON ───────────────── v0.21.0
Installed Unitful ────────────── v0.17.0
Installed StaticArrays ───────── v0.12.1
Installed Distances ──────────── v0.8.2
Installed VersionParsing ─────── v1.1.3
Installed BinDeps ────────────── v0.8.10
Updating `~/.julia/environments/v1.2/Project.toml`
[04f20302] + WorldOceanAtlasTools v0.3.3
Updating `~/.julia/environments/v1.2/Manifest.toml`
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[179af706] + CFTime v0.0.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[a9693cdc] + CondaBinDeps v0.1.0
[9a962f9c] + DataAPI v1.1.0
[124859b0] + DataDeps v0.7.1
[864edb3b] + DataStructures v0.17.6
[b4f34e82] + Distances v0.8.2
[cd3eb016] + HTTP v0.8.8
[83e8ac13] + IniFile v0.5.0
[682c06a0] + JSON v0.21.0
[7eb4fadd] + Match v1.0.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[85f8d34a] + NCDatasets v0.9.5
[b8a86587] + NearestNeighbors v0.4.4
[cfe838f4] + OceanGrids v0.1.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[30578b45] + URIParser v0.4.0
[1986cc42] + Unitful v0.17.0
[81def892] + VersionParsing v1.1.3
[04f20302] + WorldOceanAtlasTools v0.3.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building MbedTLS ───→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building Conda ─────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building NCDatasets → `~/.julia/packages/NCDatasets/uW2kc/deps/build.log`
Testing WorldOceanAtlasTools
Resolving package versions...
Status `/tmp/jl_587b46/Manifest.toml`
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[179af706] CFTime v0.0.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[a9693cdc] CondaBinDeps v0.1.0
[9a962f9c] DataAPI v1.1.0
[124859b0] DataDeps v0.7.1
[864edb3b] DataStructures v0.17.6
[b4f34e82] Distances v0.8.2
[cd3eb016] HTTP v0.8.8
[83e8ac13] IniFile v0.5.0
[682c06a0] JSON v0.21.0
[7eb4fadd] Match v1.0.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[85f8d34a] NCDatasets v0.9.5
[b8a86587] NearestNeighbors v0.4.4
[cfe838f4] OceanGrids v0.1.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[30578b45] URIParser v0.4.0
[1986cc42] Unitful v0.17.0
[81def892] VersionParsing v1.1.3
[04f20302] WorldOceanAtlasTools v0.3.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Checksum not provided, add to the Datadep Registration the following hash line
│ hash = "278ffd1a2d615bc2f0cc79b5608d1b47c1be722fe251ff9f1e344c966452965e"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/verification.jl:44
Getting the 3D field of WOA18 Annual phosphate 73x36 data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Rearranging data
Reading NetCDF file
Rearranging data
Reading NetCDF file
Rearranging data
Filtering data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Reading NetCDF file
Rearranging data
Filtering data
Averaging data over each grid box
Setting μ = 0 and σ² = ∞ where no obs
Setting a realistic minimum for σ²
Array{Float64,3}
Array{Float64,3}
Test Summary: | Pass Total
Testing functions | 20 20
Citation for Temp from WOA09
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 1: Temperature. S. Levitus, Ed. NOAA Atlas NESDIS 68, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Salt from WOA09
Antonov, J. I., D. Seidov, T. P. Boyer, R. A. Locarnini, A. V. Mishonov, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 2: Salinity. S. Levitus, Ed. NOAA Atlas NESDIS 69, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Dens from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for Cond from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for O2 from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for O2sat from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for AOU from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for DSi from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIP from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIN from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for Temp from WOA13
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, C. R. Paver, J. R. Reagan, D. R. Johnson, M. Hamilton, and D. Seidov, 2013. World Ocean Atlas 2013, Volume 1: Temperature. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 73, 40 pp.
Citation for Salt from WOA13
Zweng, M. M., J. R. Reagan, J. I. Antonov, R. A. Locarnini, A. V. Mishonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, D. R. Johnson, D. Seidov, M. M. Biddle, 2013. World Ocean Atlas 2013, Volume 2: Salinity. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 74, 39 pp.
Citation for Dens from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for Cond from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for O2 from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for O2sat from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for AOU from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for DSi from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIP from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIN from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for Temp from WOA18
Locarnini, R. A., A. V. Mishonov, O. K. Baranova, T. P. Boyer, M. M. Zweng, H. E. Garcia, J. R. Reagan, D. Seidov, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 1: Temperature. A. Mishonov Technical Ed.; in preparation.
Citation for Salt from WOA18
Zweng, M. M., J. R. Reagan, D. Seidov, T. P. Boyer, R. A. Locarnini, H. E. Garcia, A. V. Mishonov, O. K. Baranova, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 2: Salinity. A. Mishonov Technical Ed.; in preparation.
Citation for Dens from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for Cond from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for O2 from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for O2sat from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for AOU from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for DSi from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIP from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIN from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Test Summary: | Pass Total
Citations | 30 30
Testing WorldOceanAtlasTools tests passed
Results with Julia v1.3.0
Testing was successful.
Last evaluation was ago and took 4 minutes, 34 seconds.
Resolving package versions...
Installed IniFile ────────────── v0.5.0
Installed SortingAlgorithms ──── v0.3.1
Installed URIParser ──────────── v0.4.0
Installed CondaBinDeps ───────── v0.1.0
Installed WorldOceanAtlasTools ─ v0.3.3
Installed Unitful ────────────── v0.17.0
Installed DataStructures ─────── v0.17.6
Installed StaticArrays ───────── v0.12.1
Installed JSON ───────────────── v0.21.0
Installed Match ──────────────── v1.0.2
Installed BinaryProvider ─────── v0.5.8
Installed Missings ───────────── v0.4.3
Installed Compat ─────────────── v2.2.0
Installed Parsers ────────────── v0.3.10
Installed OrderedCollections ─── v1.1.0
Installed NearestNeighbors ───── v0.4.4
Installed BinDeps ────────────── v0.8.10
Installed DataAPI ────────────── v1.1.0
Installed Distances ──────────── v0.8.2
Installed MbedTLS ────────────── v0.7.0
Installed DataDeps ───────────── v0.7.1
Installed OceanGrids ─────────── v0.1.3
Installed CFTime ─────────────── v0.0.3
Installed Conda ──────────────── v1.3.0
Installed VersionParsing ─────── v1.1.3
Installed StatsBase ──────────── v0.32.0
Installed HTTP ───────────────── v0.8.8
Installed NCDatasets ─────────── v0.9.5
Installed Reexport ───────────── v0.2.0
Updating `~/.julia/environments/v1.3/Project.toml`
[04f20302] + WorldOceanAtlasTools v0.3.3
Updating `~/.julia/environments/v1.3/Manifest.toml`
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[179af706] + CFTime v0.0.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[a9693cdc] + CondaBinDeps v0.1.0
[9a962f9c] + DataAPI v1.1.0
[124859b0] + DataDeps v0.7.1
[864edb3b] + DataStructures v0.17.6
[b4f34e82] + Distances v0.8.2
[cd3eb016] + HTTP v0.8.8
[83e8ac13] + IniFile v0.5.0
[682c06a0] + JSON v0.21.0
[7eb4fadd] + Match v1.0.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[85f8d34a] + NCDatasets v0.9.5
[b8a86587] + NearestNeighbors v0.4.4
[cfe838f4] + OceanGrids v0.1.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[30578b45] + URIParser v0.4.0
[1986cc42] + Unitful v0.17.0
[81def892] + VersionParsing v1.1.3
[04f20302] + WorldOceanAtlasTools v0.3.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building MbedTLS ───→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building Conda ─────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building NCDatasets → `~/.julia/packages/NCDatasets/uW2kc/deps/build.log`
Testing WorldOceanAtlasTools
Resolving package versions...
Status `/tmp/jl_ydxwpV/Manifest.toml`
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[179af706] CFTime v0.0.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[a9693cdc] CondaBinDeps v0.1.0
[9a962f9c] DataAPI v1.1.0
[124859b0] DataDeps v0.7.1
[864edb3b] DataStructures v0.17.6
[b4f34e82] Distances v0.8.2
[cd3eb016] HTTP v0.8.8
[83e8ac13] IniFile v0.5.0
[682c06a0] JSON v0.21.0
[7eb4fadd] Match v1.0.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[85f8d34a] NCDatasets v0.9.5
[b8a86587] NearestNeighbors v0.4.4
[cfe838f4] OceanGrids v0.1.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[30578b45] URIParser v0.4.0
[1986cc42] Unitful v0.17.0
[81def892] VersionParsing v1.1.3
[04f20302] WorldOceanAtlasTools v0.3.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Checksum not provided, add to the Datadep Registration the following hash line
│ hash = "278ffd1a2d615bc2f0cc79b5608d1b47c1be722fe251ff9f1e344c966452965e"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/verification.jl:44
Getting the 3D field of WOA18 Annual phosphate 73x36 data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Rearranging data
Reading NetCDF file
Rearranging data
Reading NetCDF file
Rearranging data
Filtering data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Reading NetCDF file
Rearranging data
Filtering data
Averaging data over each grid box
Setting μ = 0 and σ² = ∞ where no obs
Setting a realistic minimum for σ²
Array{Float64,3}
Array{Float64,3}
Test Summary: | Pass Total
Testing functions | 20 20
Citation for Temp from WOA09
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 1: Temperature. S. Levitus, Ed. NOAA Atlas NESDIS 68, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Salt from WOA09
Antonov, J. I., D. Seidov, T. P. Boyer, R. A. Locarnini, A. V. Mishonov, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 2: Salinity. S. Levitus, Ed. NOAA Atlas NESDIS 69, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Dens from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for Cond from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for O2 from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for O2sat from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for AOU from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for DSi from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIP from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIN from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for Temp from WOA13
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, C. R. Paver, J. R. Reagan, D. R. Johnson, M. Hamilton, and D. Seidov, 2013. World Ocean Atlas 2013, Volume 1: Temperature. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 73, 40 pp.
Citation for Salt from WOA13
Zweng, M. M., J. R. Reagan, J. I. Antonov, R. A. Locarnini, A. V. Mishonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, D. R. Johnson, D. Seidov, M. M. Biddle, 2013. World Ocean Atlas 2013, Volume 2: Salinity. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 74, 39 pp.
Citation for Dens from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for Cond from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for O2 from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for O2sat from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for AOU from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for DSi from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIP from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIN from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for Temp from WOA18
Locarnini, R. A., A. V. Mishonov, O. K. Baranova, T. P. Boyer, M. M. Zweng, H. E. Garcia, J. R. Reagan, D. Seidov, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 1: Temperature. A. Mishonov Technical Ed.; in preparation.
Citation for Salt from WOA18
Zweng, M. M., J. R. Reagan, D. Seidov, T. P. Boyer, R. A. Locarnini, H. E. Garcia, A. V. Mishonov, O. K. Baranova, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 2: Salinity. A. Mishonov Technical Ed.; in preparation.
Citation for Dens from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for Cond from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for O2 from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for O2sat from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for AOU from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for DSi from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIP from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIN from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Test Summary: | Pass Total
Citations | 30 30
Testing WorldOceanAtlasTools tests passed
Results with Julia v1.3.1-pre-7704df0a5a
Testing was successful.
Last evaluation was ago and took 4 minutes, 37 seconds.
Resolving package versions...
Installed Compat ─────────────── v2.2.0
Installed Conda ──────────────── v1.3.0
Installed WorldOceanAtlasTools ─ v0.3.3
Installed Unitful ────────────── v0.17.0
Installed MbedTLS ────────────── v0.7.0
Installed CFTime ─────────────── v0.0.3
Installed DataStructures ─────── v0.17.6
Installed StaticArrays ───────── v0.12.1
Installed BinDeps ────────────── v0.8.10
Installed StatsBase ──────────── v0.32.0
Installed OceanGrids ─────────── v0.1.3
Installed URIParser ──────────── v0.4.0
Installed Match ──────────────── v1.0.2
Installed BinaryProvider ─────── v0.5.8
Installed Missings ───────────── v0.4.3
Installed HTTP ───────────────── v0.8.8
Installed Distances ──────────── v0.8.2
Installed NCDatasets ─────────── v0.9.5
Installed IniFile ────────────── v0.5.0
Installed DataDeps ───────────── v0.7.1
Installed Reexport ───────────── v0.2.0
Installed DataAPI ────────────── v1.1.0
Installed JSON ───────────────── v0.21.0
Installed VersionParsing ─────── v1.1.3
Installed CondaBinDeps ───────── v0.1.0
Installed Parsers ────────────── v0.3.10
Installed OrderedCollections ─── v1.1.0
Installed SortingAlgorithms ──── v0.3.1
Installed NearestNeighbors ───── v0.4.4
Updating `~/.julia/environments/v1.3/Project.toml`
[04f20302] + WorldOceanAtlasTools v0.3.3
Updating `~/.julia/environments/v1.3/Manifest.toml`
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[179af706] + CFTime v0.0.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[a9693cdc] + CondaBinDeps v0.1.0
[9a962f9c] + DataAPI v1.1.0
[124859b0] + DataDeps v0.7.1
[864edb3b] + DataStructures v0.17.6
[b4f34e82] + Distances v0.8.2
[cd3eb016] + HTTP v0.8.8
[83e8ac13] + IniFile v0.5.0
[682c06a0] + JSON v0.21.0
[7eb4fadd] + Match v1.0.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[85f8d34a] + NCDatasets v0.9.5
[b8a86587] + NearestNeighbors v0.4.4
[cfe838f4] + OceanGrids v0.1.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[30578b45] + URIParser v0.4.0
[1986cc42] + Unitful v0.17.0
[81def892] + VersionParsing v1.1.3
[04f20302] + WorldOceanAtlasTools v0.3.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ─────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building MbedTLS ───→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building NCDatasets → `~/.julia/packages/NCDatasets/uW2kc/deps/build.log`
Testing WorldOceanAtlasTools
Resolving package versions...
Status `/tmp/jl_QlhIPV/Manifest.toml`
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[179af706] CFTime v0.0.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[a9693cdc] CondaBinDeps v0.1.0
[9a962f9c] DataAPI v1.1.0
[124859b0] DataDeps v0.7.1
[864edb3b] DataStructures v0.17.6
[b4f34e82] Distances v0.8.2
[cd3eb016] HTTP v0.8.8
[83e8ac13] IniFile v0.5.0
[682c06a0] JSON v0.21.0
[7eb4fadd] Match v1.0.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[85f8d34a] NCDatasets v0.9.5
[b8a86587] NearestNeighbors v0.4.4
[cfe838f4] OceanGrids v0.1.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[30578b45] URIParser v0.4.0
[1986cc42] Unitful v0.17.0
[81def892] VersionParsing v1.1.3
[04f20302] WorldOceanAtlasTools v0.3.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Checksum not provided, add to the Datadep Registration the following hash line
│ hash = "278ffd1a2d615bc2f0cc79b5608d1b47c1be722fe251ff9f1e344c966452965e"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/verification.jl:44
Getting the 3D field of WOA18 Annual phosphate 73x36 data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Rearranging data
Reading NetCDF file
Rearranging data
Reading NetCDF file
Rearranging data
Filtering data
Registering World Ocean Atlas data with DataDeps
┌ Warning: You are about to use World Ocean Atlas data.
│ Please cite the following corresponding reference(s):
│
│ Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.)
└ @ WorldOceanAtlasTools ~/.julia/packages/WorldOceanAtlasTools/StiyS/src/functions.jl:138
┌ Warning: Over-writing registration of the datadep
│ name = "WOA18_Annual_phosphate_73x36"
└ @ DataDeps ~/.julia/packages/DataDeps/ai3FE/src/registration.jl:8
Reading NetCDF file
Rearranging data
Filtering data
Averaging data over each grid box
Setting μ = 0 and σ² = ∞ where no obs
Setting a realistic minimum for σ²
Array{Float64,3}
Array{Float64,3}
Test Summary: | Pass Total
Testing functions | 20 20
Citation for Temp from WOA09
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 1: Temperature. S. Levitus, Ed. NOAA Atlas NESDIS 68, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Salt from WOA09
Antonov, J. I., D. Seidov, T. P. Boyer, R. A. Locarnini, A. V. Mishonov, H. E. Garcia, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 2: Salinity. S. Levitus, Ed. NOAA Atlas NESDIS 69, U.S. Government Printing Office, Washington, D.C., 184 pp.
Citation for Dens from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for Cond from WOA09
I could not find a citation for WOD09. Add it if you know where to find it!
Citation for O2 from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for O2sat from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for AOU from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed. NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, D.C., 344 pp.
Citation for DSi from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIP from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for DIN from WOA09
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, M. M. Zweng, O. K. Baranova, and D. R. Johnson, 2010. World Ocean Atlas 2009, Volume 4: Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed. NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, D.C., 398 pp.
Citation for Temp from WOA13
Locarnini, R. A., A. V. Mishonov, J. I. Antonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, M. M. Zweng, C. R. Paver, J. R. Reagan, D. R. Johnson, M. Hamilton, and D. Seidov, 2013. World Ocean Atlas 2013, Volume 1: Temperature. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 73, 40 pp.
Citation for Salt from WOA13
Zweng, M. M., J. R. Reagan, J. I. Antonov, R. A. Locarnini, A. V. Mishonov, T. P. Boyer, H. E. Garcia, O. K. Baranova, D. R. Johnson, D. Seidov, M. M. Biddle, 2013. World Ocean Atlas 2013, Volume 2: Salinity. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 74, 39 pp.
Citation for Dens from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for Cond from WOA13
Boyer, T. P., J. I. Antonov, O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, D. R. Johnson, R. A. Locarnini, A. V. Mishonov, T. D. O'Brien, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, and M. M. Zweng, 2013: World Ocean Database 2013, NOAA Atlas NESDIS 72, S. Levitus, Ed., A. Mishonov, Technical Ed.; Silver Spring, MD, 209 pp., doi:10.7289/V5NZ85MT
Citation for O2 from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for O2sat from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for AOU from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 75, 27 pp.
Citation for DSi from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIP from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for DIN from WOA13
Garcia, H. E., R. A. Locarnini, T. P. Boyer, J. I. Antonov, O. K. Baranova, M. M. Zweng, J. R. Reagan, D. R. Johnson, 2014. World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). S. Levitus, Ed., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp.
Citation for Temp from WOA18
Locarnini, R. A., A. V. Mishonov, O. K. Baranova, T. P. Boyer, M. M. Zweng, H. E. Garcia, J. R. Reagan, D. Seidov, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 1: Temperature. A. Mishonov Technical Ed.; in preparation.
Citation for Salt from WOA18
Zweng, M. M., J. R. Reagan, D. Seidov, T. P. Boyer, R. A. Locarnini, H. E. Garcia, A. V. Mishonov, O. K. Baranova, K. Weathers, C. R. Paver, and I. Smolyar, 2018. World Ocean Atlas 2018, Volume 2: Salinity. A. Mishonov Technical Ed.; in preparation.
Citation for Dens from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for Cond from WOA18
Boyer, T. P., O. K. Baranova, C. Coleman, H. E. Garcia, A. Grodsky, R. A. Locarnini, A. V. Mishonov, C. R. Paver, J. R. Reagan, D. Seidov, I. V. Smolyar, K. Weathers, M. M. Zweng,(2018): World Ocean Database 2018. A. V. Mishonov, Technical Editor, NOAA Atlas NESDIS 87.
Citation for O2 from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for O2sat from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for AOU from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. A. Mishonov Technical Ed.; in preparation.
Citation for DSi from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIP from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Citation for DIN from WOA18
Garcia, H. E., K. Weathers, C. R. Paver, I. Smolyar, T. P. Boyer, R. A. Locarnini, M. M. Zweng, A. V. Mishonov, O. K. Baranova, D. Seidov, and J. R. Reagan, 2018. World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate+nitrite, silicate). A. Mishonov Technical Ed.; in preparation.
Test Summary: | Pass Total
Citations | 30 30
Testing WorldOceanAtlasTools tests passed