If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was successful .
Last evaluation was ago and took 9 minutes, 6 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Missings ──────────────────── v0.4.3
Installed JSExpr ────────────────────── v0.5.1
Installed YAML ──────────────────────── v0.3.2
Installed DataAPI ───────────────────── v1.1.0
Installed Hiccup ────────────────────── v0.2.2
Installed MbedTLS ───────────────────── v0.7.0
Installed IntervalTrees ─────────────── v1.0.0
Installed VariantVisualization ──────── v0.4.0
Installed TableTraits ───────────────── v1.0.0
Installed Pidfile ───────────────────── v1.1.0
Installed Mustache ──────────────────── v0.5.13
Installed DataFrames ────────────────── v0.19.4
Installed BinaryProvider ────────────── v0.5.8
Installed IndexableBitVectors ───────── v1.0.0
Installed WebIO ─────────────────────── v0.8.11
Installed Codecs ────────────────────── v0.5.0
Installed Conda ─────────────────────── v1.3.0
Installed BioCore ───────────────────── v2.0.5
Installed Colors ────────────────────── v0.9.6
Installed Polynomials ───────────────── v0.6.0
Installed URIParser ─────────────────── v0.4.0
Installed ArgParse ──────────────────── v0.6.2
Installed Requires ──────────────────── v0.5.2
Installed DataValueInterfaces ───────── v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed Twiddle ───────────────────── v1.1.1
Installed PlotlyJS ──────────────────── v0.13.0
Installed DocStringExtensions ───────── v0.8.1
Installed InvertedIndices ───────────── v1.0.0
Installed BioSymbols ────────────────── v3.1.0
Installed FunctionalCollections ─────── v0.5.0
Installed Reexport ──────────────────── v0.2.0
Installed Compat ────────────────────── v2.2.0
Installed BGZFStreams ───────────────── v0.3.0
Installed Automa ────────────────────── v0.8.0
Installed Widgets ───────────────────── v0.6.2
Installed OrderedCollections ────────── v1.1.0
Installed Observables ───────────────── v0.2.3
Installed Tables ────────────────────── v0.2.11
Installed GeneticVariation ──────────── v0.4.0
Installed IniFile ───────────────────── v0.5.0
Installed Mux ───────────────────────── v0.7.0
Installed TextWrap ──────────────────── v0.3.0
Installed RecipesBase ───────────────── v0.7.0
Installed Combinatorics ─────────────── v0.7.0
Installed FixedPointNumbers ─────────── v0.6.1
Installed PlotlyBase ────────────────── v0.3.0
Installed TranscodingStreams ────────── v0.9.5
Installed Parsers ───────────────────── v0.3.10
Installed DataStructures ────────────── v0.17.6
Installed LaTeXStrings ──────────────── v1.0.3
Installed CodecZlib ─────────────────── v0.6.0
Installed JSON ──────────────────────── v0.21.0
Installed HTTP ──────────────────────── v0.8.8
Installed AssetRegistry ─────────────── v0.1.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed CategoricalArrays ─────────── v0.7.3
Installed BioSequences ──────────────── v1.1.0
Installed BufferedStreams ───────────── v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Blink ─────────────────────── v0.12.0
Installed VersionParsing ────────────── v1.1.3
Installed Lazy ──────────────────────── v0.13.2
Installed ORCA ──────────────────────── v0.3.0
Installed WebSockets ────────────────── v1.5.2
Installed MacroTools ────────────────── v0.5.2
Installed BinDeps ───────────────────── v0.8.10
Installed ColorTypes ────────────────── v0.8.0
Updating `~/.julia/environments/v1.2/Project.toml`
[7f8bf45c] + VariantVisualization v0.4.0
Updating `~/.julia/environments/v1.2/Manifest.toml`
[c7e460c6] + ArgParse v0.6.2
[bf4720bc] + AssetRegistry v0.1.0
[67c07d97] + Automa v0.8.0
[28d598bf] + BGZFStreams v0.3.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[37cfa864] + BioCore v2.0.5
[7e6ae17a] + BioSequences v1.1.0
[3c28c6f8] + BioSymbols v3.1.0
[ad839575] + Blink v0.12.0
[e1450e63] + BufferedStreams v1.0.0
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[19ecbf4d] + Codecs v0.5.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[861a8166] + Combinatorics v0.7.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[ffbed154] + DocStringExtensions v0.8.1
[53c48c17] + FixedPointNumbers v0.6.1
[de31a74c] + FunctionalCollections v0.5.0
[9bc6ac9d] + GeneticVariation v0.4.0
[cd3eb016] + HTTP v0.8.8
[9fb69e20] + Hiccup v0.2.2
[1cb3b9ac] + IndexableBitVectors v1.0.0
[83e8ac13] + IniFile v0.5.0
[524e6230] + IntervalTrees v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[97c1335a] + JSExpr v0.5.1
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[50d2b5c4] + Lazy v0.13.2
[1914dd2f] + MacroTools v0.5.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[ffc61752] + Mustache v0.5.13
[a975b10e] + Mux v0.7.0
[47be7bcc] + ORCA v0.3.0
[510215fc] + Observables v0.2.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[fa939f87] + Pidfile v1.1.0
[a03496cd] + PlotlyBase v0.3.0
[f0f68f2c] + PlotlyJS v0.13.0
[f27b6e38] + Polynomials v0.6.0
[2dfb63ee] + PooledArrays v0.5.2
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[b718987f] + TextWrap v0.3.0
[3bb67fe8] + TranscodingStreams v0.9.5
[7200193e] + Twiddle v1.1.1
[30578b45] + URIParser v0.4.0
[7f8bf45c] + VariantVisualization v0.4.0
[81def892] + VersionParsing v1.1.3
[0f1e0344] + WebIO v0.8.11
[104b5d7c] + WebSockets v1.5.2
[cc8bc4a8] + Widgets v0.6.2
[ddb6d928] + YAML v0.3.2
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[7b1f6079] + FileWatching
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building CodecZlib ───────────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building MbedTLS ─────────────→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building WebIO ───────────────→ `~/.julia/packages/WebIO/2mZPb/deps/build.log`
Building Blink ───────────────→ `~/.julia/packages/Blink/AO8uN/deps/build.log`
Building PlotlyJS ────────────→ `~/.julia/packages/PlotlyJS/b9Efu/deps/build.log`
Building Conda ───────────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building ORCA ────────────────→ `~/.julia/packages/ORCA/xULYl/deps/build.log`
Building VariantVisualization → `~/.julia/packages/VariantVisualization/1yoNl/deps/build.log`
Testing VariantVisualization
Status `/tmp/jl_EZDGBG/Manifest.toml`
[c7e460c6] ArgParse v0.6.2
[bf4720bc] AssetRegistry v0.1.0
[67c07d97] Automa v0.8.0
[28d598bf] BGZFStreams v0.3.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[37cfa864] BioCore v2.0.5
[7e6ae17a] BioSequences v1.1.0
[3c28c6f8] BioSymbols v3.1.0
[ad839575] Blink v0.12.0
[e1450e63] BufferedStreams v1.0.0
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[19ecbf4d] Codecs v0.5.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[861a8166] Combinatorics v0.7.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[ffbed154] DocStringExtensions v0.8.1
[53c48c17] FixedPointNumbers v0.6.1
[de31a74c] FunctionalCollections v0.5.0
[9bc6ac9d] GeneticVariation v0.4.0
[cd3eb016] HTTP v0.8.8
[9fb69e20] Hiccup v0.2.2
[1cb3b9ac] IndexableBitVectors v1.0.0
[83e8ac13] IniFile v0.5.0
[524e6230] IntervalTrees v1.0.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[97c1335a] JSExpr v0.5.1
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[50d2b5c4] Lazy v0.13.2
[1914dd2f] MacroTools v0.5.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[ffc61752] Mustache v0.5.13
[a975b10e] Mux v0.7.0
[47be7bcc] ORCA v0.3.0
[510215fc] Observables v0.2.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[fa939f87] Pidfile v1.1.0
[a03496cd] PlotlyBase v0.3.0
[f0f68f2c] PlotlyJS v0.13.0
[f27b6e38] Polynomials v0.6.0
[2dfb63ee] PooledArrays v0.5.2
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[b718987f] TextWrap v0.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[7200193e] Twiddle v1.1.1
[30578b45] URIParser v0.4.0
[7f8bf45c] VariantVisualization v0.4.0
[81def892] VersionParsing v1.1.3
[0f1e0344] WebIO v0.8.11
[104b5d7c] WebSockets v1.5.2
[cc8bc4a8] Widgets v0.6.2
[ddb6d928] YAML v0.3.2
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[7b1f6079] FileWatching [`@stdlib/FileWatching`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[9abbd945] Profile [`@stdlib/Profile`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: using HTTP.stack in module Mux conflicts with an existing identifier.
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
[ Info: Compiling VCF parser...
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
Running tests:
-----------------------------------------
-----------------------------------------
Testing: New VCF Utils
-----------------------------------------
-----------------------------------------
┌ Warning: `DataFrame(t::Type, nrows::Integer, ncols::Integer)` is deprecated, use `DataFrame([Vector{t}(undef, nrows) for i = 1:ncols])` instead.
│ caller = generate_genotype_array(::Array{Any,1}, ::String) at vcf_utils_complete.jl:664
└ @ VariantVisualization ~/.julia/packages/VariantVisualization/1yoNl/src/vcf_utils_complete.jl:664
Test Summary: | Pass Total
VCFUtils | 55 55
Testing VariantVisualization tests passed
Results with Julia v1.3.0
Testing was successful .
Last evaluation was ago and took 9 minutes, 9 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed URIParser ─────────────────── v0.4.0
Installed IniFile ───────────────────── v0.5.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed YAML ──────────────────────── v0.3.2
Installed Mux ───────────────────────── v0.7.0
Installed BufferedStreams ───────────── v1.0.0
Installed WebSockets ────────────────── v1.5.2
Installed VariantVisualization ──────── v0.4.0
Installed Hiccup ────────────────────── v0.2.2
Installed DataStructures ────────────── v0.17.6
Installed Lazy ──────────────────────── v0.13.2
Installed DocStringExtensions ───────── v0.8.1
Installed ORCA ──────────────────────── v0.3.0
Installed BinaryProvider ────────────── v0.5.8
Installed Compat ────────────────────── v2.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed CategoricalArrays ─────────── v0.7.3
Installed Missings ──────────────────── v0.4.3
Installed Parsers ───────────────────── v0.3.10
Installed MacroTools ────────────────── v0.5.2
Installed Combinatorics ─────────────── v0.7.0
Installed IndexableBitVectors ───────── v1.0.0
Installed Mustache ──────────────────── v0.5.13
Installed TableTraits ───────────────── v1.0.0
Installed WebIO ─────────────────────── v0.8.11
Installed Observables ───────────────── v0.2.3
Installed GeneticVariation ──────────── v0.4.0
Installed FixedPointNumbers ─────────── v0.6.1
Installed OrderedCollections ────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed BGZFStreams ───────────────── v0.3.0
Installed BinDeps ───────────────────── v0.8.10
Installed BioSequences ──────────────── v1.1.0
Installed FunctionalCollections ─────── v0.5.0
Installed ColorTypes ────────────────── v0.8.0
Installed RecipesBase ───────────────── v0.7.0
Installed DataAPI ───────────────────── v1.1.0
Installed Tables ────────────────────── v0.2.11
Installed JSExpr ────────────────────── v0.5.1
Installed Codecs ────────────────────── v0.5.0
Installed Automa ────────────────────── v0.8.0
Installed Polynomials ───────────────── v0.6.0
Installed MbedTLS ───────────────────── v0.7.0
Installed DataValueInterfaces ───────── v1.0.0
Installed IntervalTrees ─────────────── v1.0.0
Installed Pidfile ───────────────────── v1.1.0
Installed Conda ─────────────────────── v1.3.0
Installed LaTeXStrings ──────────────── v1.0.3
Installed Requires ──────────────────── v0.5.2
Installed VersionParsing ────────────── v1.1.3
Installed PlotlyBase ────────────────── v0.3.0
Installed Colors ────────────────────── v0.9.6
Installed Widgets ───────────────────── v0.6.2
Installed PlotlyJS ──────────────────── v0.13.0
Installed AssetRegistry ─────────────── v0.1.0
Installed CodecZlib ─────────────────── v0.6.0
Installed TextWrap ──────────────────── v0.3.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed HTTP ──────────────────────── v0.8.8
Installed PooledArrays ──────────────── v0.5.2
Installed Twiddle ───────────────────── v1.1.1
Installed ArgParse ──────────────────── v0.6.2
Installed TranscodingStreams ────────── v0.9.5
Installed DataFrames ────────────────── v0.19.4
Installed Reexport ──────────────────── v0.2.0
Installed BioCore ───────────────────── v2.0.5
Installed Blink ─────────────────────── v0.12.0
Installed BioSymbols ────────────────── v3.1.0
Updating `~/.julia/environments/v1.3/Project.toml`
[7f8bf45c] + VariantVisualization v0.4.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[c7e460c6] + ArgParse v0.6.2
[bf4720bc] + AssetRegistry v0.1.0
[67c07d97] + Automa v0.8.0
[28d598bf] + BGZFStreams v0.3.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[37cfa864] + BioCore v2.0.5
[7e6ae17a] + BioSequences v1.1.0
[3c28c6f8] + BioSymbols v3.1.0
[ad839575] + Blink v0.12.0
[e1450e63] + BufferedStreams v1.0.0
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[19ecbf4d] + Codecs v0.5.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[861a8166] + Combinatorics v0.7.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[ffbed154] + DocStringExtensions v0.8.1
[53c48c17] + FixedPointNumbers v0.6.1
[de31a74c] + FunctionalCollections v0.5.0
[9bc6ac9d] + GeneticVariation v0.4.0
[cd3eb016] + HTTP v0.8.8
[9fb69e20] + Hiccup v0.2.2
[1cb3b9ac] + IndexableBitVectors v1.0.0
[83e8ac13] + IniFile v0.5.0
[524e6230] + IntervalTrees v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[97c1335a] + JSExpr v0.5.1
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[50d2b5c4] + Lazy v0.13.2
[1914dd2f] + MacroTools v0.5.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[ffc61752] + Mustache v0.5.13
[a975b10e] + Mux v0.7.0
[47be7bcc] + ORCA v0.3.0
[510215fc] + Observables v0.2.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[fa939f87] + Pidfile v1.1.0
[a03496cd] + PlotlyBase v0.3.0
[f0f68f2c] + PlotlyJS v0.13.0
[f27b6e38] + Polynomials v0.6.0
[2dfb63ee] + PooledArrays v0.5.2
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[b718987f] + TextWrap v0.3.0
[3bb67fe8] + TranscodingStreams v0.9.5
[7200193e] + Twiddle v1.1.1
[30578b45] + URIParser v0.4.0
[7f8bf45c] + VariantVisualization v0.4.0
[81def892] + VersionParsing v1.1.3
[0f1e0344] + WebIO v0.8.11
[104b5d7c] + WebSockets v1.5.2
[cc8bc4a8] + Widgets v0.6.2
[ddb6d928] + YAML v0.3.2
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[7b1f6079] + FileWatching
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building CodecZlib ───────────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building MbedTLS ─────────────→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building WebIO ───────────────→ `~/.julia/packages/WebIO/2mZPb/deps/build.log`
Building Blink ───────────────→ `~/.julia/packages/Blink/AO8uN/deps/build.log`
Building PlotlyJS ────────────→ `~/.julia/packages/PlotlyJS/b9Efu/deps/build.log`
Building Conda ───────────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building ORCA ────────────────→ `~/.julia/packages/ORCA/xULYl/deps/build.log`
Building VariantVisualization → `~/.julia/packages/VariantVisualization/1yoNl/deps/build.log`
Testing VariantVisualization
Status `/tmp/jl_z81BDy/Manifest.toml`
[c7e460c6] ArgParse v0.6.2
[bf4720bc] AssetRegistry v0.1.0
[67c07d97] Automa v0.8.0
[28d598bf] BGZFStreams v0.3.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[37cfa864] BioCore v2.0.5
[7e6ae17a] BioSequences v1.1.0
[3c28c6f8] BioSymbols v3.1.0
[ad839575] Blink v0.12.0
[e1450e63] BufferedStreams v1.0.0
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[19ecbf4d] Codecs v0.5.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[861a8166] Combinatorics v0.7.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[ffbed154] DocStringExtensions v0.8.1
[53c48c17] FixedPointNumbers v0.6.1
[de31a74c] FunctionalCollections v0.5.0
[9bc6ac9d] GeneticVariation v0.4.0
[cd3eb016] HTTP v0.8.8
[9fb69e20] Hiccup v0.2.2
[1cb3b9ac] IndexableBitVectors v1.0.0
[83e8ac13] IniFile v0.5.0
[524e6230] IntervalTrees v1.0.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[97c1335a] JSExpr v0.5.1
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[50d2b5c4] Lazy v0.13.2
[1914dd2f] MacroTools v0.5.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[ffc61752] Mustache v0.5.13
[a975b10e] Mux v0.7.0
[47be7bcc] ORCA v0.3.0
[510215fc] Observables v0.2.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[fa939f87] Pidfile v1.1.0
[a03496cd] PlotlyBase v0.3.0
[f0f68f2c] PlotlyJS v0.13.0
[f27b6e38] Polynomials v0.6.0
[2dfb63ee] PooledArrays v0.5.2
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[b718987f] TextWrap v0.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[7200193e] Twiddle v1.1.1
[30578b45] URIParser v0.4.0
[7f8bf45c] VariantVisualization v0.4.0
[81def892] VersionParsing v1.1.3
[0f1e0344] WebIO v0.8.11
[104b5d7c] WebSockets v1.5.2
[cc8bc4a8] Widgets v0.6.2
[ddb6d928] YAML v0.3.2
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[7b1f6079] FileWatching [`@stdlib/FileWatching`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[9abbd945] Profile [`@stdlib/Profile`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: using HTTP.stack in module Mux conflicts with an existing identifier.
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
[ Info: Compiling VCF parser...
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
Running tests:
-----------------------------------------
-----------------------------------------
Testing: New VCF Utils
-----------------------------------------
-----------------------------------------
┌ Warning: `DataFrame(t::Type, nrows::Integer, ncols::Integer)` is deprecated, use `DataFrame([Vector{t}(undef, nrows) for i = 1:ncols])` instead.
│ caller = ip:0x0
└ @ Core :-1
Test Summary: | Pass Total
VCFUtils | 55 55
Testing VariantVisualization tests passed
Results with Julia v1.3.1-pre-7704df0a5a
Testing was successful .
Last evaluation was ago and took 8 minutes, 45 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Mustache ──────────────────── v0.5.13
Installed JSExpr ────────────────────── v0.5.1
Installed ColorTypes ────────────────── v0.8.0
Installed Conda ─────────────────────── v1.3.0
Installed DataStructures ────────────── v0.17.6
Installed Automa ────────────────────── v0.8.0
Installed VariantVisualization ──────── v0.4.0
Installed Colors ────────────────────── v0.9.6
Installed Hiccup ────────────────────── v0.2.2
Installed FunctionalCollections ─────── v0.5.0
Installed Pidfile ───────────────────── v1.1.0
Installed BioCore ───────────────────── v2.0.5
Installed Tables ────────────────────── v0.2.11
Installed DataFrames ────────────────── v0.19.4
Installed MbedTLS ───────────────────── v0.7.0
Installed Polynomials ───────────────── v0.6.0
Installed IntervalTrees ─────────────── v1.0.0
Installed FixedPointNumbers ─────────── v0.6.1
Installed Compat ────────────────────── v2.2.0
Installed BinDeps ───────────────────── v0.8.10
Installed WebSockets ────────────────── v1.5.2
Installed MacroTools ────────────────── v0.5.2
Installed LaTeXStrings ──────────────── v1.0.3
Installed BufferedStreams ───────────── v1.0.0
Installed BioSymbols ────────────────── v3.1.0
Installed HTTP ──────────────────────── v0.8.8
Installed URIParser ─────────────────── v0.4.0
Installed CodecZlib ─────────────────── v0.6.0
Installed PlotlyBase ────────────────── v0.3.0
Installed PlotlyJS ──────────────────── v0.13.0
Installed TableTraits ───────────────── v1.0.0
Installed ArgParse ──────────────────── v0.6.2
Installed Missings ──────────────────── v0.4.3
Installed Widgets ───────────────────── v0.6.2
Installed YAML ──────────────────────── v0.3.2
Installed DocStringExtensions ───────── v0.8.1
Installed PooledArrays ──────────────── v0.5.2
Installed BinaryProvider ────────────── v0.5.8
Installed TranscodingStreams ────────── v0.9.5
Installed Requires ──────────────────── v0.5.2
Installed Twiddle ───────────────────── v1.1.1
Installed Lazy ──────────────────────── v0.13.2
Installed InvertedIndices ───────────── v1.0.0
Installed Codecs ────────────────────── v0.5.0
Installed IniFile ───────────────────── v0.5.0
Installed WebIO ─────────────────────── v0.8.11
Installed TextWrap ──────────────────── v0.3.0
Installed Combinatorics ─────────────── v0.7.0
Installed DataValueInterfaces ───────── v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed ORCA ──────────────────────── v0.3.0
Installed CategoricalArrays ─────────── v0.7.3
Installed Blink ─────────────────────── v0.12.0
Installed DataAPI ───────────────────── v1.1.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed GeneticVariation ──────────── v0.4.0
Installed AssetRegistry ─────────────── v0.1.0
Installed RecipesBase ───────────────── v0.7.0
Installed JSON ──────────────────────── v0.21.0
Installed BGZFStreams ───────────────── v0.3.0
Installed OrderedCollections ────────── v1.1.0
Installed VersionParsing ────────────── v1.1.3
Installed SortingAlgorithms ─────────── v0.3.1
Installed Parsers ───────────────────── v0.3.10
Installed BioSequences ──────────────── v1.1.0
Installed Observables ───────────────── v0.2.3
Installed IndexableBitVectors ───────── v1.0.0
Installed Mux ───────────────────────── v0.7.0
Updating `~/.julia/environments/v1.3/Project.toml`
[7f8bf45c] + VariantVisualization v0.4.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[c7e460c6] + ArgParse v0.6.2
[bf4720bc] + AssetRegistry v0.1.0
[67c07d97] + Automa v0.8.0
[28d598bf] + BGZFStreams v0.3.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[37cfa864] + BioCore v2.0.5
[7e6ae17a] + BioSequences v1.1.0
[3c28c6f8] + BioSymbols v3.1.0
[ad839575] + Blink v0.12.0
[e1450e63] + BufferedStreams v1.0.0
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[19ecbf4d] + Codecs v0.5.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[861a8166] + Combinatorics v0.7.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[ffbed154] + DocStringExtensions v0.8.1
[53c48c17] + FixedPointNumbers v0.6.1
[de31a74c] + FunctionalCollections v0.5.0
[9bc6ac9d] + GeneticVariation v0.4.0
[cd3eb016] + HTTP v0.8.8
[9fb69e20] + Hiccup v0.2.2
[1cb3b9ac] + IndexableBitVectors v1.0.0
[83e8ac13] + IniFile v0.5.0
[524e6230] + IntervalTrees v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[97c1335a] + JSExpr v0.5.1
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[50d2b5c4] + Lazy v0.13.2
[1914dd2f] + MacroTools v0.5.2
[739be429] + MbedTLS v0.7.0
[e1d29d7a] + Missings v0.4.3
[ffc61752] + Mustache v0.5.13
[a975b10e] + Mux v0.7.0
[47be7bcc] + ORCA v0.3.0
[510215fc] + Observables v0.2.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[fa939f87] + Pidfile v1.1.0
[a03496cd] + PlotlyBase v0.3.0
[f0f68f2c] + PlotlyJS v0.13.0
[f27b6e38] + Polynomials v0.6.0
[2dfb63ee] + PooledArrays v0.5.2
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[b718987f] + TextWrap v0.3.0
[3bb67fe8] + TranscodingStreams v0.9.5
[7200193e] + Twiddle v1.1.1
[30578b45] + URIParser v0.4.0
[7f8bf45c] + VariantVisualization v0.4.0
[81def892] + VersionParsing v1.1.3
[0f1e0344] + WebIO v0.8.11
[104b5d7c] + WebSockets v1.5.2
[cc8bc4a8] + Widgets v0.6.2
[ddb6d928] + YAML v0.3.2
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[7b1f6079] + FileWatching
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building CodecZlib ───────────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building MbedTLS ─────────────→ `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
Building WebIO ───────────────→ `~/.julia/packages/WebIO/2mZPb/deps/build.log`
Building Blink ───────────────→ `~/.julia/packages/Blink/AO8uN/deps/build.log`
Building PlotlyJS ────────────→ `~/.julia/packages/PlotlyJS/b9Efu/deps/build.log`
Building Conda ───────────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building ORCA ────────────────→ `~/.julia/packages/ORCA/xULYl/deps/build.log`
Building VariantVisualization → `~/.julia/packages/VariantVisualization/1yoNl/deps/build.log`
Testing VariantVisualization
Status `/tmp/jl_9K8mx1/Manifest.toml`
[c7e460c6] ArgParse v0.6.2
[bf4720bc] AssetRegistry v0.1.0
[67c07d97] Automa v0.8.0
[28d598bf] BGZFStreams v0.3.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[37cfa864] BioCore v2.0.5
[7e6ae17a] BioSequences v1.1.0
[3c28c6f8] BioSymbols v3.1.0
[ad839575] Blink v0.12.0
[e1450e63] BufferedStreams v1.0.0
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[19ecbf4d] Codecs v0.5.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[861a8166] Combinatorics v0.7.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[ffbed154] DocStringExtensions v0.8.1
[53c48c17] FixedPointNumbers v0.6.1
[de31a74c] FunctionalCollections v0.5.0
[9bc6ac9d] GeneticVariation v0.4.0
[cd3eb016] HTTP v0.8.8
[9fb69e20] Hiccup v0.2.2
[1cb3b9ac] IndexableBitVectors v1.0.0
[83e8ac13] IniFile v0.5.0
[524e6230] IntervalTrees v1.0.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[97c1335a] JSExpr v0.5.1
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[50d2b5c4] Lazy v0.13.2
[1914dd2f] MacroTools v0.5.2
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.3
[ffc61752] Mustache v0.5.13
[a975b10e] Mux v0.7.0
[47be7bcc] ORCA v0.3.0
[510215fc] Observables v0.2.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[fa939f87] Pidfile v1.1.0
[a03496cd] PlotlyBase v0.3.0
[f0f68f2c] PlotlyJS v0.13.0
[f27b6e38] Polynomials v0.6.0
[2dfb63ee] PooledArrays v0.5.2
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[b718987f] TextWrap v0.3.0
[3bb67fe8] TranscodingStreams v0.9.5
[7200193e] Twiddle v1.1.1
[30578b45] URIParser v0.4.0
[7f8bf45c] VariantVisualization v0.4.0
[81def892] VersionParsing v1.1.3
[0f1e0344] WebIO v0.8.11
[104b5d7c] WebSockets v1.5.2
[cc8bc4a8] Widgets v0.6.2
[ddb6d928] YAML v0.3.2
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[7b1f6079] FileWatching [`@stdlib/FileWatching`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[9abbd945] Profile [`@stdlib/Profile`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: using HTTP.stack in module Mux conflicts with an existing identifier.
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(IO, PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:40 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:334.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition savehtml(PlotlyBase.Plot{TT} where TT<:PlotlyBase.AbstractTrace, AbstractString) in module PlotlyBase at /root/.julia/packages/PlotlyBase/80KwD/src/output.jl:52 overwritten in module PlotlyJS at /root/.julia/packages/PlotlyJS/b9Efu/src/display.jl:361.
** incremental compilation may be fatally broken for this module **
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
[ Info: Compiling VCF parser...
/root/.julia/conda/3/envs/_ORCA_jl_/lib/orca_app/orca: error while loading shared libraries: libgtk-x11-2.0.so.0: cannot open shared object file: No such file or directory
Running tests:
-----------------------------------------
-----------------------------------------
Testing: New VCF Utils
-----------------------------------------
-----------------------------------------
┌ Warning: `DataFrame(t::Type, nrows::Integer, ncols::Integer)` is deprecated, use `DataFrame([Vector{t}(undef, nrows) for i = 1:ncols])` instead.
│ caller = ip:0x0
└ @ Core :-1
Test Summary: | Pass Total
VCFUtils | 55 55
Testing VariantVisualization tests passed