If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 3 minutes, 5 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Requires ──────────────────── v0.5.2
Installed Missings ──────────────────── v0.4.3
Installed DataAPI ───────────────────── v1.1.0
Installed DataValueInterfaces ───────── v1.0.0
Installed SpatialEcology ────────────── v0.7.0
Installed TableTraits ───────────────── v1.0.0
Installed StatsBase ─────────────────── v0.32.0
Installed DataFrames ────────────────── v0.19.4
Installed PooledArrays ──────────────── v0.5.2
Installed Tables ────────────────────── v0.2.11
Installed Reexport ──────────────────── v0.2.0
Installed RecipesBase ───────────────── v0.7.0
Installed OrderedCollections ────────── v1.1.0
Installed EcoBase ───────────────────── v0.0.7
Installed Compat ────────────────────── v2.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed RandomNumbers ─────────────── v1.3.0
Installed JSON ──────────────────────── v0.21.0
Installed DataStructures ────────────── v0.17.6
Installed Parsers ───────────────────── v0.3.10
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed DataFramesMeta ────────────── v0.5.0
Installed CategoricalArrays ─────────── v0.7.3
Installed RandomBooleanMatrices ─────── v0.1.1
Updating `~/.julia/environments/v1.2/Project.toml`
[348f2d5d] + SpatialEcology v0.7.0
Updating `~/.julia/environments/v1.2/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[a58aae7d] + EcoBase v0.0.7
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing SpatialEcology
Resolving package versions...
Installed BinaryProvider ──── v0.5.8
Installed Showoff ─────────── v0.3.1
Installed ArrayLayouts ────── v0.1.5
Installed Colors ──────────── v0.9.6
Installed Plots ───────────── v0.28.2
Installed Contour ─────────── v0.5.1
Installed Measures ────────── v0.3.0
Installed FilePathsBase ───── v0.7.0
Installed IterTools ───────── v1.3.0
Installed WeakRefStrings ──── v0.6.1
Installed FixedPointNumbers ─ v0.6.1
Installed FFMPEG ──────────── v0.2.3
Installed FillArrays ──────── v0.8.2
Installed NaNMath ─────────── v0.3.3
Installed StaticArrays ────── v0.12.1
Installed PlotUtils ───────── v0.6.1
Installed GeometryTypes ───── v0.7.6
Installed ColorTypes ──────── v0.8.0
Installed MacroTools ──────── v0.5.2
Installed CSV ─────────────── v0.5.18
Installed PlotThemes ──────── v1.0.0
Installed LazyArrays ──────── v0.14.10
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_zyCVou/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[a58aae7d] EcoBase v0.0.7
[c87230d0] FFMPEG v0.2.3
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[77ba4419] NaNMath v0.3.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[2dfb63ee] PooledArrays v0.5.2
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
Expression: occupancy(cmb) == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Evaluated: [8, 7, 7, 8, 8, 6, 6, 7, 8, 6, 6, 8] == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
Expression: occupancy(cmi) == [11, 13, 10, 12, 12, 13, 9, 13]
Evaluated: [11, 12, 11, 13, 10, 13, 10, 12] == [11, 13, 10, 12, 12, 13, 9, 13]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
Expression: occupancy(cmf) == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Evaluated: [9, 9, 9, 10, 9, 10, 11, 11, 8] == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
Expression: richness(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
Expression: richness(cmi) == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Evaluated: [7, 7, 7, 6, 8, 8, 6, 7, 8, 8, 7, 6, 7] == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
Expression: richness(cmf) == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Evaluated: [8, 7, 8, 7, 7, 8, 8, 8, 7, 9, 9] == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
Expression: getspecies(cmb, 4) == [true, true, true, true, true, true, true, false]
Evaluated: Bool[1, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 1, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
Expression: getspecies(cmi, 2) == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Evaluated: [15, 15, 0, 2, 28, 99, 25, 29, 23, 90, 96, 7, 43] == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
Expression: gcm[3] == 0.37980641711782925
Evaluated: 0.08724510824225518 == 0.37980641711782925
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
Expression: sitetotals(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
Expression: sitetotals(cmi) == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Evaluated: [351, 228, 359, 291, 357, 496, 319, 242, 297, 356, 443, 316, 357] == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
Expression: (sitetotals(cmf))[5] ≈ 4.52174342959108
Evaluated: 2.918329485324914 ≈ 4.52174342959108
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
Expression: speciestotals(cmi) == [474, 653, 501, 577, 777, 521, 464, 744]
Evaluated: [511, 472, 599, 620, 423, 664, 464, 659] == [474, 653, 501, 577, 777, 521, 464, 744]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
Expression: (speciestotals(cmf))[8] ≈ 6.542348823677926
Evaluated: 4.780138474567269 ≈ 6.542348823677926
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
Expression: cooccurring(cmb, 1, 3) == [true, true, true, true, true, false, true, false]
Evaluated: Bool[0, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 0, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
Expression: cooccurring(cmf, [8, 3]) == [false, true, false, true, true, true, false, true, true, true, true]
Evaluated: Bool[1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 1] == Bool[0, 1, 0, 1, 1, 1, 0, 1, 1, 1, 1]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
Test Summary: | Pass Fail Total
ComMatrix | 38 16 54
ERROR: LoadError: LoadError: Some tests did not pass: 38 passed, 16 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:6
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/runtests.jl:2
ERROR: Package SpatialEcology errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 2 minutes, 48 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed InvertedIndices ───────────── v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed EcoBase ───────────────────── v0.0.7
Installed Compat ────────────────────── v2.2.0
Installed Parsers ───────────────────── v0.3.10
Installed SpatialEcology ────────────── v0.7.0
Installed DataStructures ────────────── v0.17.6
Installed CategoricalArrays ─────────── v0.7.3
Installed RecipesBase ───────────────── v0.7.0
Installed TableTraits ───────────────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed Tables ────────────────────── v0.2.11
Installed JSON ──────────────────────── v0.21.0
Installed OrderedCollections ────────── v1.1.0
Installed DataFramesMeta ────────────── v0.5.0
Installed DataAPI ───────────────────── v1.1.0
Installed DataValueInterfaces ───────── v1.0.0
Installed Requires ──────────────────── v0.5.2
Installed RandomBooleanMatrices ─────── v0.1.1
Installed PooledArrays ──────────────── v0.5.2
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed RandomNumbers ─────────────── v1.3.0
Installed Reexport ──────────────────── v0.2.0
Installed DataFrames ────────────────── v0.19.4
Installed StatsBase ─────────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[348f2d5d] + SpatialEcology v0.7.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[a58aae7d] + EcoBase v0.0.7
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing SpatialEcology
Resolving package versions...
Installed MacroTools ──────── v0.5.2
Installed BinaryProvider ──── v0.5.8
Installed Plots ───────────── v0.28.2
Installed IterTools ───────── v1.3.0
Installed StaticArrays ────── v0.12.1
Installed LazyArrays ──────── v0.14.10
Installed PlotThemes ──────── v1.0.0
Installed FixedPointNumbers ─ v0.6.1
Installed Showoff ─────────── v0.3.1
Installed ArrayLayouts ────── v0.1.5
Installed NaNMath ─────────── v0.3.3
Installed ColorTypes ──────── v0.8.0
Installed CSV ─────────────── v0.5.18
Installed Colors ──────────── v0.9.6
Installed PlotUtils ───────── v0.6.1
Installed Measures ────────── v0.3.0
Installed FilePathsBase ───── v0.7.0
Installed Contour ─────────── v0.5.1
Installed FFMPEG ──────────── v0.2.3
Installed GeometryTypes ───── v0.7.6
Installed FillArrays ──────── v0.8.2
Installed WeakRefStrings ──── v0.6.1
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_ab23fd/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[a58aae7d] EcoBase v0.0.7
[c87230d0] FFMPEG v0.2.3
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[77ba4419] NaNMath v0.3.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[2dfb63ee] PooledArrays v0.5.2
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
Expression: occupancy(cmb) == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Evaluated: [8, 7, 7, 8, 8, 6, 6, 7, 8, 6, 6, 8] == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
Expression: occupancy(cmi) == [11, 13, 10, 12, 12, 13, 9, 13]
Evaluated: [11, 12, 11, 13, 10, 13, 10, 12] == [11, 13, 10, 12, 12, 13, 9, 13]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
Expression: occupancy(cmf) == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Evaluated: [9, 9, 9, 10, 9, 10, 11, 11, 8] == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
Expression: richness(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
Expression: richness(cmi) == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Evaluated: [7, 7, 7, 6, 8, 8, 6, 7, 8, 8, 7, 6, 7] == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
Expression: richness(cmf) == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Evaluated: [8, 7, 8, 7, 7, 8, 8, 8, 7, 9, 9] == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
Expression: getspecies(cmb, 4) == [true, true, true, true, true, true, true, false]
Evaluated: Bool[1, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 1, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
Expression: getspecies(cmi, 2) == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Evaluated: [15, 15, 0, 2, 28, 99, 25, 29, 23, 90, 96, 7, 43] == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
Expression: gcm[3] == 0.37980641711782925
Evaluated: 0.08724510824225518 == 0.37980641711782925
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
Expression: sitetotals(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
Expression: sitetotals(cmi) == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Evaluated: [351, 228, 359, 291, 357, 496, 319, 242, 297, 356, 443, 316, 357] == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
Expression: (sitetotals(cmf))[5] ≈ 4.52174342959108
Evaluated: 2.918329485324914 ≈ 4.52174342959108
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
Expression: speciestotals(cmi) == [474, 653, 501, 577, 777, 521, 464, 744]
Evaluated: [511, 472, 599, 620, 423, 664, 464, 659] == [474, 653, 501, 577, 777, 521, 464, 744]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
Expression: (speciestotals(cmf))[8] ≈ 6.542348823677926
Evaluated: 4.780138474567269 ≈ 6.542348823677926
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
Expression: cooccurring(cmb, 1, 3) == [true, true, true, true, true, false, true, false]
Evaluated: Bool[0, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 0, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
Expression: cooccurring(cmf, [8, 3]) == [false, true, false, true, true, true, false, true, true, true, true]
Evaluated: Bool[1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 1] == Bool[0, 1, 0, 1, 1, 1, 0, 1, 1, 1, 1]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
Test Summary: | Pass Fail Total
ComMatrix | 38 16 54
ERROR: LoadError: LoadError: Some tests did not pass: 38 passed, 16 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:6
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/runtests.jl:2
ERROR: Package SpatialEcology errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 3 minutes, 5 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Tables ────────────────────── v0.2.11
Installed DataFramesMeta ────────────── v0.5.0
Installed RandomBooleanMatrices ─────── v0.1.1
Installed Compat ────────────────────── v2.2.0
Installed SpatialEcology ────────────── v0.7.0
Installed DataStructures ────────────── v0.17.6
Installed StatsBase ─────────────────── v0.32.0
Installed DataFrames ────────────────── v0.19.4
Installed Reexport ──────────────────── v0.2.0
Installed DataValueInterfaces ───────── v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed Requires ──────────────────── v0.5.2
Installed EcoBase ───────────────────── v0.0.7
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed CategoricalArrays ─────────── v0.7.3
Installed RecipesBase ───────────────── v0.7.0
Installed DataAPI ───────────────────── v1.1.0
Installed Missings ──────────────────── v0.4.3
Installed Parsers ───────────────────── v0.3.10
Installed RandomNumbers ─────────────── v1.3.0
Installed OrderedCollections ────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed InvertedIndices ───────────── v1.0.0
Updating `~/.julia/environments/v1.3/Project.toml`
[348f2d5d] + SpatialEcology v0.7.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[a58aae7d] + EcoBase v0.0.7
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing SpatialEcology
Resolving package versions...
Installed Plots ───────────── v0.28.2
Installed WeakRefStrings ──── v0.6.1
Installed ColorTypes ──────── v0.8.0
Installed NaNMath ─────────── v0.3.3
Installed ArrayLayouts ────── v0.1.5
Installed Colors ──────────── v0.9.6
Installed GeometryTypes ───── v0.7.6
Installed LazyArrays ──────── v0.14.10
Installed FixedPointNumbers ─ v0.6.1
Installed MacroTools ──────── v0.5.2
Installed StaticArrays ────── v0.12.1
Installed Showoff ─────────── v0.3.1
Installed FillArrays ──────── v0.8.2
Installed BinaryProvider ──── v0.5.8
Installed IterTools ───────── v1.3.0
Installed FilePathsBase ───── v0.7.0
Installed CSV ─────────────── v0.5.18
Installed FFMPEG ──────────── v0.2.3
Installed PlotThemes ──────── v1.0.0
Installed Contour ─────────── v0.5.1
Installed Measures ────────── v0.3.0
Installed PlotUtils ───────── v0.6.1
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_9fJjbo/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[a58aae7d] EcoBase v0.0.7
[c87230d0] FFMPEG v0.2.3
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[77ba4419] NaNMath v0.3.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[2dfb63ee] PooledArrays v0.5.2
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
Expression: occupancy(cmb) == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Evaluated: [8, 7, 7, 8, 8, 6, 6, 7, 8, 6, 6, 8] == [6, 6, 8, 7, 7, 8, 8, 8, 6, 6, 6, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:26
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
Expression: occupancy(cmi) == [11, 13, 10, 12, 12, 13, 9, 13]
Evaluated: [11, 12, 11, 13, 10, 13, 10, 12] == [11, 13, 10, 12, 12, 13, 9, 13]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:27
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
Expression: occupancy(cmf) == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Evaluated: [9, 9, 9, 10, 9, 10, 11, 11, 8] == [10, 10, 9, 10, 11, 8, 8, 10, 9]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:28
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
Expression: richness(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:30
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
Expression: richness(cmi) == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Evaluated: [7, 7, 7, 6, 8, 8, 6, 7, 8, 8, 7, 6, 7] == [7, 7, 8, 8, 5, 8, 8, 7, 8, 6, 6, 8, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:31
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
Expression: richness(cmf) == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Evaluated: [8, 7, 8, 7, 7, 8, 8, 8, 7, 9, 9] == [8, 8, 8, 9, 8, 8, 8, 7, 7, 7, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:32
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
Expression: getspecies(cmb, 4) == [true, true, true, true, true, true, true, false]
Evaluated: Bool[1, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 1, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:58
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
Expression: getspecies(cmi, 2) == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Evaluated: [15, 15, 0, 2, 28, 99, 25, 29, 23, 90, 96, 7, 43] == [48, 89, 34, 39, 29, 73, 49, 23, 62, 71, 60, 57, 19]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:59
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
Expression: gcm[3] == 0.37980641711782925
Evaluated: 0.08724510824225518 == 0.37980641711782925
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:61
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
Expression: sitetotals(cmb) == [12, 11, 10, 10, 11, 10, 12, 7]
Evaluated: [11, 12, 11, 9, 11, 10, 11, 10] == [12, 11, 10, 10, 11, 10, 12, 7]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:78
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
Expression: sitetotals(cmi) == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Evaluated: [351, 228, 359, 291, 357, 496, 319, 242, 297, 356, 443, 316, 357] == [334, 352, 466, 443, 139, 339, 314, 448, 414, 303, 473, 411, 275]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:80
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
Expression: (sitetotals(cmf))[5] ≈ 4.52174342959108
Evaluated: 2.918329485324914 ≈ 4.52174342959108
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:82
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
Expression: speciestotals(cmi) == [474, 653, 501, 577, 777, 521, 464, 744]
Evaluated: [511, 472, 599, 620, 423, 664, 464, 659] == [474, 653, 501, 577, 777, 521, 464, 744]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:85
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
Expression: (speciestotals(cmf))[8] ≈ 6.542348823677926
Evaluated: 4.780138474567269 ≈ 6.542348823677926
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:87
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
Expression: cooccurring(cmb, 1, 3) == [true, true, true, true, true, false, true, false]
Evaluated: Bool[0, 1, 1, 1, 1, 1, 1, 1] == Bool[1, 1, 1, 1, 1, 0, 1, 0]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:92
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
ComMatrix: Test Failed at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
Expression: cooccurring(cmf, [8, 3]) == [false, true, false, true, true, true, false, true, true, true, true]
Evaluated: Bool[1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 1] == Bool[0, 1, 0, 1, 1, 1, 0, 1, 1, 1, 1]
Stacktrace:
[1] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:93
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:7
Test Summary: | Pass Fail Total
ComMatrix | 38 16 54
ERROR: LoadError: LoadError: Some tests did not pass: 38 passed, 16 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/ComMatrix_test.jl:6
in expression starting at /root/.julia/packages/SpatialEcology/FKPSg/test/runtests.jl:2
ERROR: Package SpatialEcology errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10