If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 4 minutes, 43 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed DataAPI ───────────────────── v1.1.0
Installed Missings ──────────────────── v0.4.3
Installed FileIO ────────────────────── v1.1.0
Installed TableTraits ───────────────── v1.0.0
Installed SOM ───────────────────────── v0.4.0
Installed Colors ────────────────────── v0.9.6
Installed CSV ───────────────────────── v0.5.18
Installed DataFrames ────────────────── v0.19.4
Installed PDMats ────────────────────── v0.9.10
Installed BinaryProvider ────────────── v0.5.8
Installed DataValueInterfaces ───────── v1.0.0
Installed Conda ─────────────────────── v1.3.0
Installed StatsFuns ─────────────────── v0.9.0
Installed ArrayLayouts ──────────────── v0.1.5
Installed StatsBase ─────────────────── v0.32.0
Installed URIParser ─────────────────── v0.4.0
Installed PyCall ────────────────────── v1.91.2
Installed PooledArrays ──────────────── v0.5.2
Installed Requires ──────────────────── v0.5.2
Installed Rmath ─────────────────────── v0.5.1
Installed Reexport ──────────────────── v0.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed Compat ────────────────────── v2.2.0
Installed OrderedCollections ────────── v1.1.0
Installed Tables ────────────────────── v0.2.11
Installed WeakRefStrings ────────────── v0.6.1
Installed FilePathsBase ─────────────── v0.7.0
Installed Parsers ───────────────────── v0.3.10
Installed RData ─────────────────────── v0.6.3
Installed DataStructures ────────────── v0.17.6
Installed FixedPointNumbers ─────────── v0.6.1
Installed FillArrays ────────────────── v0.8.2
Installed LaTeXStrings ──────────────── v1.0.3
Installed Distributions ─────────────── v0.21.9
Installed TranscodingStreams ────────── v0.9.5
Installed Mocking ───────────────────── v0.7.0
Installed CodecZlib ─────────────────── v0.6.0
Installed TimeZones ─────────────────── v0.10.3
Installed JSON ──────────────────────── v0.21.0
Installed StaticArrays ──────────────── v0.12.1
Installed CategoricalArrays ─────────── v0.7.3
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed QuadGK ────────────────────── v2.1.1
Installed VersionParsing ────────────── v1.1.3
Installed PyPlot ────────────────────── v2.8.2
Installed SortingAlgorithms ─────────── v0.3.1
Installed LazyArrays ────────────────── v0.14.10
Installed EzXML ─────────────────────── v0.9.5
Installed Distances ─────────────────── v0.8.2
Installed Arpack ────────────────────── v0.3.1
Installed MacroTools ────────────────── v0.5.2
Installed BinDeps ───────────────────── v0.8.10
Installed ColorTypes ────────────────── v0.8.0
Installed ProgressMeter ─────────────── v1.2.0
Installed SpecialFunctions ──────────── v0.8.0
Installed RDatasets ─────────────────── v0.6.5
Updating `~/.julia/environments/v1.2/Project.toml`
[172a5912] + SOM v0.4.0
Updating `~/.julia/environments/v1.2/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[78c3b35d] + Mocking v0.7.0
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[92933f4c] + ProgressMeter v1.2.0
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[1fd47b50] + QuadGK v2.1.1
[df47a6cb] + RData v0.6.3
[ce6b1742] + RDatasets v0.6.5
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[172a5912] + SOM v0.4.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[f269a46b] + TimeZones v0.10.3
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ──────────→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building TimeZones ───────→ `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Testing SOM
Resolving package versions...
Status `/tmp/jl_qwaYl3/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[92933f4c] ProgressMeter v1.2.0
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[1fd47b50] QuadGK v2.1.1
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[172a5912] SOM v0.4.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Error loading PyPlot InitError(:PyPlot, PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
)
Matplotlib is not correctly installed!
See the documentation at https://andreasdominik.github.io/SOM.jl/stable/
for details and potential solutions.
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
Stacktrace:
[1] pyimport(::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:544
[2] pyimport_conda(::String, ::String, ::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:702
[3] pyimport_conda at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:701 [inlined]
[4] __init__() at /root/.julia/packages/PyPlot/4wzW1/src/init.jl:179
[5] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:685
[6] _require_search_from_serialized(::Base.PkgId, ::String) at ./loading.jl:765
[7] _tryrequire_from_serialized(::Base.PkgId, ::UInt64, ::Nothing) at ./loading.jl:700
[8] _require_from_serialized(::String) at ./loading.jl:731
[9] _require(::Base.PkgId) at ./loading.jl:1023
[10] require(::Base.PkgId) at ./loading.jl:911
[11] require(::Module, ::Symbol) at ./loading.jl:906
[12] include at ./boot.jl:328 [inlined]
[13] include_relative(::Module, ::String) at ./loading.jl:1094
[14] include(::Module, ::String) at ./Base.jl:31
[15] include(::String) at ./client.jl:431
[16] top-level scope at none:5
during initialization of module PyPlot
in expression starting at /root/.julia/packages/SOM/T8WNF/test/runtests.jl:38
ERROR: Package SOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 4 minutes, 30 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed URIParser ─────────────────── v0.4.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Arpack ────────────────────── v0.3.1
Installed DataStructures ────────────── v0.17.6
Installed StaticArrays ──────────────── v0.12.1
Installed SOM ───────────────────────── v0.4.0
Installed LazyArrays ────────────────── v0.14.10
Installed CSV ───────────────────────── v0.5.18
Installed QuadGK ────────────────────── v2.1.1
Installed Compat ────────────────────── v2.2.0
Installed FileIO ────────────────────── v1.1.0
Installed CategoricalArrays ─────────── v0.7.3
Installed StatsFuns ─────────────────── v0.9.0
Installed Parsers ───────────────────── v0.3.10
Installed BinaryProvider ────────────── v0.5.8
Installed InvertedIndices ───────────── v1.0.0
Installed ProgressMeter ─────────────── v1.2.0
Installed Missings ──────────────────── v0.4.3
Installed TableTraits ───────────────── v1.0.0
Installed Rmath ─────────────────────── v0.5.1
Installed PyCall ────────────────────── v1.91.2
Installed MacroTools ────────────────── v0.5.2
Installed Distributions ─────────────── v0.21.9
Installed OrderedCollections ────────── v1.1.0
Installed FixedPointNumbers ─────────── v0.6.1
Installed SpecialFunctions ──────────── v0.8.0
Installed Mocking ───────────────────── v0.7.0
Installed ArrayLayouts ──────────────── v0.1.5
Installed BinDeps ───────────────────── v0.8.10
Installed ColorTypes ────────────────── v0.8.0
Installed DataAPI ───────────────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed RData ─────────────────────── v0.6.3
Installed Distances ─────────────────── v0.8.2
Installed EzXML ─────────────────────── v0.9.5
Installed Tables ────────────────────── v0.2.11
Installed RDatasets ─────────────────── v0.6.5
Installed PyPlot ────────────────────── v2.8.2
Installed DataValueInterfaces ───────── v1.0.0
Installed LaTeXStrings ──────────────── v1.0.3
Installed TimeZones ─────────────────── v0.10.3
Installed Colors ────────────────────── v0.9.6
Installed Conda ─────────────────────── v1.3.0
Installed Requires ──────────────────── v0.5.2
Installed VersionParsing ────────────── v1.1.3
Installed FilePathsBase ─────────────── v0.7.0
Installed WeakRefStrings ────────────── v0.6.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed DataFrames ────────────────── v0.19.4
Installed CodecZlib ─────────────────── v0.6.0
Installed PDMats ────────────────────── v0.9.10
Installed TranscodingStreams ────────── v0.9.5
Installed Reexport ──────────────────── v0.2.0
Installed FillArrays ────────────────── v0.8.2
Installed StatsBase ─────────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[172a5912] + SOM v0.4.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[78c3b35d] + Mocking v0.7.0
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[92933f4c] + ProgressMeter v1.2.0
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[1fd47b50] + QuadGK v2.1.1
[df47a6cb] + RData v0.6.3
[ce6b1742] + RDatasets v0.6.5
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[172a5912] + SOM v0.4.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[f269a46b] + TimeZones v0.10.3
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ──────────→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building TimeZones ───────→ `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Testing SOM
Resolving package versions...
Status `/tmp/jl_4J7ytE/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[92933f4c] ProgressMeter v1.2.0
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[1fd47b50] QuadGK v2.1.1
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[172a5912] SOM v0.4.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Error loading PyPlot InitError(:PyPlot, PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
)
Matplotlib is not correctly installed!
See the documentation at https://andreasdominik.github.io/SOM.jl/stable/
for details and potential solutions.
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
Stacktrace:
[1] pyimport(::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:544
[2] pyimport_conda(::String, ::String, ::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:702
[3] pyimport_conda at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:701 [inlined]
[4] __init__() at /root/.julia/packages/PyPlot/4wzW1/src/init.jl:179
[5] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:692
[6] _require_search_from_serialized(::Base.PkgId, ::String) at ./loading.jl:776
[7] _tryrequire_from_serialized(::Base.PkgId, ::UInt64, ::Nothing) at ./loading.jl:707
[8] _require_from_serialized(::String) at ./loading.jl:738
[9] _require(::Base.PkgId) at ./loading.jl:1034
[10] require(::Base.PkgId) at ./loading.jl:922
[11] require(::Module, ::Symbol) at ./loading.jl:917
[12] include at ./boot.jl:328 [inlined]
[13] include_relative(::Module, ::String) at ./loading.jl:1105
[14] include(::Module, ::String) at ./Base.jl:31
[15] include(::String) at ./client.jl:424
[16] top-level scope at none:6
during initialization of module PyPlot
in expression starting at /root/.julia/packages/SOM/T8WNF/test/runtests.jl:38
ERROR: Package SOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 4 minutes, 51 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed ColorTypes ────────────────── v0.8.0
Installed Conda ─────────────────────── v1.3.0
Installed PyCall ────────────────────── v1.91.2
Installed DataStructures ────────────── v0.17.6
Installed SOM ───────────────────────── v0.4.0
Installed Colors ────────────────────── v0.9.6
Installed RData ─────────────────────── v0.6.3
Installed TimeZones ─────────────────── v0.10.3
Installed WeakRefStrings ────────────── v0.6.1
Installed QuadGK ────────────────────── v2.1.1
Installed ArrayLayouts ──────────────── v0.1.5
Installed Tables ────────────────────── v0.2.11
Installed SpecialFunctions ──────────── v0.8.0
Installed LazyArrays ────────────────── v0.14.10
Installed DataFrames ────────────────── v0.19.4
Installed Compat ────────────────────── v2.2.0
Installed BinDeps ───────────────────── v0.8.10
Installed StaticArrays ──────────────── v0.12.1
Installed StatsBase ─────────────────── v0.32.0
Installed MacroTools ────────────────── v0.5.2
Installed Mocking ───────────────────── v0.7.0
Installed FillArrays ────────────────── v0.8.2
Installed FixedPointNumbers ─────────── v0.6.1
Installed LaTeXStrings ──────────────── v1.0.3
Installed FileIO ────────────────────── v1.1.0
Installed Arpack ────────────────────── v0.3.1
Installed CodecZlib ─────────────────── v0.6.0
Installed StatsFuns ─────────────────── v0.9.0
Installed URIParser ─────────────────── v0.4.0
Installed TableTraits ───────────────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed PooledArrays ──────────────── v0.5.2
Installed BinaryProvider ────────────── v0.5.8
Installed FilePathsBase ─────────────── v0.7.0
Installed ProgressMeter ─────────────── v1.2.0
Installed Rmath ─────────────────────── v0.5.1
Installed TranscodingStreams ────────── v0.9.5
Installed InvertedIndices ───────────── v1.0.0
Installed EzXML ─────────────────────── v0.9.5
Installed Requires ──────────────────── v0.5.2
Installed PyPlot ────────────────────── v2.8.2
Installed Distances ─────────────────── v0.8.2
Installed DataValueInterfaces ───────── v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed JSON ──────────────────────── v0.21.0
Installed Distributions ─────────────── v0.21.9
Installed PDMats ────────────────────── v0.9.10
Installed DataAPI ───────────────────── v1.1.0
Installed CategoricalArrays ─────────── v0.7.3
Installed OrderedCollections ────────── v1.1.0
Installed Parsers ───────────────────── v0.3.10
Installed VersionParsing ────────────── v1.1.3
Installed SortingAlgorithms ─────────── v0.3.1
Installed CSV ───────────────────────── v0.5.18
Installed RDatasets ─────────────────── v0.6.5
Updating `~/.julia/environments/v1.3/Project.toml`
[172a5912] + SOM v0.4.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[944b1d66] + CodecZlib v0.6.0
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[78c3b35d] + Mocking v0.7.0
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[92933f4c] + ProgressMeter v1.2.0
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[1fd47b50] + QuadGK v2.1.1
[df47a6cb] + RData v0.6.3
[ce6b1742] + RDatasets v0.6.5
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[172a5912] + SOM v0.4.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[f269a46b] + TimeZones v0.10.3
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building TimeZones ───────→ `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ──────────→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Testing SOM
Resolving package versions...
Status `/tmp/jl_uU9hQp/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[92933f4c] ProgressMeter v1.2.0
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[1fd47b50] QuadGK v2.1.1
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[172a5912] SOM v0.4.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Error loading PyPlot InitError(:PyPlot, PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
)
Matplotlib is not correctly installed!
See the documentation at https://andreasdominik.github.io/SOM.jl/stable/
for details and potential solutions.
ERROR: LoadError: InitError: PyError (PyImport_ImportModule
The Python package matplotlib could not be found by pyimport. Usually this means
that you did not install matplotlib in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the matplotlib module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the matplotlib module, you can use `pyimport_conda("matplotlib", PKG)`,
where PKG is the Anaconda package the contains the module matplotlib,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'matplotlib'",)
Stacktrace:
[1] pyimport(::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:544
[2] pyimport_conda(::String, ::String, ::String) at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:702
[3] pyimport_conda at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:701 [inlined]
[4] __init__() at /root/.julia/packages/PyPlot/4wzW1/src/init.jl:179
[5] _include_from_serialized(::String, ::Array{Any,1}) at ./loading.jl:692
[6] _require_search_from_serialized(::Base.PkgId, ::String) at ./loading.jl:776
[7] _tryrequire_from_serialized(::Base.PkgId, ::UInt64, ::Nothing) at ./loading.jl:707
[8] _require_from_serialized(::String) at ./loading.jl:738
[9] _require(::Base.PkgId) at ./loading.jl:1034
[10] require(::Base.PkgId) at ./loading.jl:922
[11] require(::Module, ::Symbol) at ./loading.jl:917
[12] include at ./boot.jl:328 [inlined]
[13] include_relative(::Module, ::String) at ./loading.jl:1105
[14] include(::Module, ::String) at ./Base.jl:31
[15] include(::String) at ./client.jl:424
[16] top-level scope at none:6
during initialization of module PyPlot
in expression starting at /root/.julia/packages/SOM/T8WNF/test/runtests.jl:38
ERROR: Package SOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10