If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 6 minutes, 50 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed LearnBase ─────────────────── v0.2.2
Installed Missings ──────────────────── v0.4.3
Installed DataAPI ───────────────────── v1.1.0
Installed PDMats ────────────────────── v0.9.10
Installed TableTraits ───────────────── v1.0.0
Installed LineSearches ──────────────── v7.0.1
Installed ScientificTypes ───────────── v0.2.6
Installed MLJLinearModels ───────────── v0.2.1
Installed URIParser ─────────────────── v0.4.0
Installed BinaryProvider ────────────── v0.5.8
Installed StatsBase ─────────────────── v0.32.0
Installed StatsFuns ─────────────────── v0.9.0
Installed CommonSubexpressions ──────── v0.2.0
Installed DocStringExtensions ───────── v0.8.1
Installed NLSolversBase ─────────────── v7.5.0
Installed DataValueInterfaces ───────── v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed Requires ──────────────────── v0.5.2
Installed ForwardDiff ───────────────── v0.10.7
Installed Compat ────────────────────── v2.2.0
Installed OrderedCollections ────────── v1.1.0
Installed LinearMaps ────────────────── v2.5.2
Installed Rmath ─────────────────────── v0.5.1
Installed Tables ────────────────────── v0.2.11
Installed RecipesBase ───────────────── v0.7.0
Installed Calculus ──────────────────── v0.5.1
Installed Distributions ─────────────── v0.21.9
Installed Parsers ───────────────────── v0.3.10
Installed FixedPointNumbers ─────────── v0.6.1
Installed IterativeSolvers ──────────── v0.8.1
Installed DataStructures ────────────── v0.17.6
Installed FillArrays ────────────────── v0.8.2
Installed DiffEqDiffTools ───────────── v1.5.0
Installed DiffRules ─────────────────── v0.1.0
Installed ArrayInterface ────────────── v2.0.0
Installed StaticArrays ──────────────── v0.12.1
Installed DiffResults ───────────────── v0.0.4
Installed JSON ──────────────────────── v0.21.0
Installed Parameters ────────────────── v0.12.0
Installed LossFunctions ─────────────── v0.5.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed CategoricalArrays ─────────── v0.7.3
Installed NaNMath ───────────────────── v0.3.3
Installed QuadGK ────────────────────── v2.1.1
Installed SortingAlgorithms ─────────── v0.3.1
Installed PositiveFactorizations ────── v0.2.3
Installed BinDeps ───────────────────── v0.8.10
Installed Optim ─────────────────────── v0.19.5
Installed SpecialFunctions ──────────── v0.8.0
Installed Arpack ────────────────────── v0.3.1
Installed ColorTypes ────────────────── v0.8.0
Installed MLJBase ───────────────────── v0.8.4
Updating `~/.julia/environments/v1.2/Project.toml`
[6ee0df7b] + MLJLinearModels v0.2.1
Updating `~/.julia/environments/v1.2/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[324d7699] + CategoricalArrays v0.7.3
[3da002f7] + ColorTypes v0.8.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[31c24e10] + Distributions v0.21.9
[ffbed154] + DocStringExtensions v0.8.1
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[41ab1584] + InvertedIndices v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[7f8f8fb0] + LearnBase v0.2.2
[d3d80556] + LineSearches v7.0.1
[7a12625a] + LinearMaps v2.5.2
[30fc2ffe] + LossFunctions v0.5.1
[a7f614a8] + MLJBase v0.8.4
[6ee0df7b] + MLJLinearModels v0.2.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[321657f4] + ScientificTypes v0.2.6
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Testing MLJLinearModels
Resolving package versions...
Installed ArrayLayouts ─────── v0.1.5
Installed Conda ────────────── v1.3.0
Installed PyCall ───────────── v1.91.2
Installed PooledArrays ─────── v0.5.2
Installed RCall ────────────── v0.13.4
Installed DataFrames ───────── v0.19.4
Installed FilePathsBase ────── v0.7.0
Installed RData ────────────── v0.6.3
Installed WinReg ───────────── v0.3.1
Installed ShiftedArrays ────── v1.0.0
Installed WeakRefStrings ───── v0.6.1
Installed TimeZones ────────── v0.10.3
Installed TranscodingStreams ─ v0.9.5
Installed CodecZlib ────────── v0.6.0
Installed StatsModels ──────── v0.6.7
Installed RDatasets ────────── v0.6.5
Installed CSV ──────────────── v0.5.18
Installed Mocking ──────────── v0.7.0
Installed LazyArrays ───────── v0.14.10
Installed EzXML ────────────── v0.9.5
Installed VersionParsing ───── v1.1.3
Installed MacroTools ───────── v0.5.2
Installed FileIO ───────────── v1.1.0
Building Conda ────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ───→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building RCall ────→ `~/.julia/packages/RCall/g7dhB/deps/build.log`
Building EzXML ────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1094
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:431
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/backwards_compatible_isolation.jl:647
Building TimeZones → `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_u4mQn8/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[49dc2e85] Calculus v0.5.1
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[31c24e10] Distributions v0.21.9
[ffbed154] DocStringExtensions v0.8.1
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[41ab1584] InvertedIndices v1.0.0
[42fd0dbc] IterativeSolvers v0.8.1
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[7f8f8fb0] LearnBase v0.2.2
[d3d80556] LineSearches v7.0.1
[7a12625a] LinearMaps v2.5.2
[30fc2ffe] LossFunctions v0.5.1
[a7f614a8] MLJBase v0.8.4
[6ee0df7b] MLJLinearModels v0.2.1
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[1fd47b50] QuadGK v2.1.1
[6f49c342] RCall v0.13.4
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[321657f4] ScientificTypes v0.2.6
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
== UTILS ==
Test Summary: | Pass Total
Checks | 4 4
Test Summary: | Pass Total
Augment | 2 2
Test Summary: | Pass Total
Apply | 8 8
Test Summary: | Pass Total
Sigmoid | 13 13
Test Summary: | Pass Total
Hat matrix | 1 1
Test Summary: | Pass Total
Soft-thresh | 1 1
Test Summary: | Pass Total
Clip | 2 2
== LOSS-PENALTY ==
> generic <
Test Summary: | Pass Total
LPCost basics | 11 11
Test Summary: | Pass Total
Comp LPs | 30 30
Test Summary: | Pass Total
Compose | 19 19
Test Summary: | Pass Total
Logistic | 1 1
Test Summary: | Pass Total
Multinomial | 2 2
> utils <
Test Summary: | Pass Total
elastic net | 7 7
> robust <
Test Summary: | Pass Total
Robust Loss | 7 7
== GLR ==
> constructors <
Test Summary: | Pass Total
Constructors | 49 49
> utils <
Test Summary: | Pass Total
Tools | 2 2
Test Summary: | Pass Total
Objectives | 9 9
> grads-hess <
Test Summary: | Pass Total
GH> Ridge | 3 3
Test Summary: | Pass Total
GH> EN/Lasso | 8 8
Test Summary: | Pass Total
GH> LogitL2 | 12 12
Test Summary: | Pass Total
GH> MultinL2 | 6 6
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_)
Evaluated: 79.36959522807834 == 79.36959522807831
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_ .* maskint)
Evaluated: 74.49309469154164 == 74.49309469154166
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
Test Summary: | Pass Fail Total
GH> Huber | 11 2 13
ERROR: LoadError: LoadError: Some tests did not pass: 11 passed, 2 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:192
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/runtests.jl:13
ERROR: Package MLJLinearModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 6 minutes, 40 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed URIParser ─────────────────── v0.4.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed DiffResults ───────────────── v0.0.4
Installed Arpack ────────────────────── v0.3.1
Installed DataStructures ────────────── v0.17.6
Installed ScientificTypes ───────────── v0.2.6
Installed LossFunctions ─────────────── v0.5.1
Installed MLJLinearModels ───────────── v0.2.1
Installed LineSearches ──────────────── v7.0.1
Installed CategoricalArrays ─────────── v0.7.3
Installed StatsFuns ─────────────────── v0.9.0
Installed StaticArrays ──────────────── v0.12.1
Installed DocStringExtensions ───────── v0.8.1
Installed Compat ────────────────────── v2.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed QuadGK ────────────────────── v2.1.1
Installed BinaryProvider ────────────── v0.5.8
Installed Parsers ───────────────────── v0.3.10
Installed Missings ──────────────────── v0.4.3
Installed NLSolversBase ─────────────── v7.5.0
Installed Parameters ────────────────── v0.12.0
Installed Rmath ─────────────────────── v0.5.1
Installed LearnBase ─────────────────── v0.2.2
Installed Distributions ─────────────── v0.21.9
Installed MLJBase ───────────────────── v0.8.4
Installed TableTraits ───────────────── v1.0.0
Installed PositiveFactorizations ────── v0.2.3
Installed OrderedCollections ────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed FixedPointNumbers ─────────── v0.6.1
Installed SpecialFunctions ──────────── v0.8.0
Installed CommonSubexpressions ──────── v0.2.0
Installed ColorTypes ────────────────── v0.8.0
Installed RecipesBase ───────────────── v0.7.0
Installed BinDeps ───────────────────── v0.8.10
Installed DataAPI ───────────────────── v1.1.0
Installed Tables ────────────────────── v0.2.11
Installed NaNMath ───────────────────── v0.3.3
Installed DataValueInterfaces ───────── v1.0.0
Installed ForwardDiff ───────────────── v0.10.7
Installed Optim ─────────────────────── v0.19.5
Installed DiffRules ─────────────────── v0.1.0
Installed Calculus ──────────────────── v0.5.1
Installed ArrayInterface ────────────── v2.0.0
Installed DiffEqDiffTools ───────────── v1.5.0
Installed Requires ──────────────────── v0.5.2
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed FillArrays ────────────────── v0.8.2
Installed PDMats ────────────────────── v0.9.10
Installed Reexport ──────────────────── v0.2.0
Installed StatsBase ─────────────────── v0.32.0
Installed LinearMaps ────────────────── v2.5.2
Installed IterativeSolvers ──────────── v0.8.1
Updating `~/.julia/environments/v1.3/Project.toml`
[6ee0df7b] + MLJLinearModels v0.2.1
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[324d7699] + CategoricalArrays v0.7.3
[3da002f7] + ColorTypes v0.8.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[31c24e10] + Distributions v0.21.9
[ffbed154] + DocStringExtensions v0.8.1
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[41ab1584] + InvertedIndices v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[7f8f8fb0] + LearnBase v0.2.2
[d3d80556] + LineSearches v7.0.1
[7a12625a] + LinearMaps v2.5.2
[30fc2ffe] + LossFunctions v0.5.1
[a7f614a8] + MLJBase v0.8.4
[6ee0df7b] + MLJLinearModels v0.2.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[321657f4] + ScientificTypes v0.2.6
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Testing MLJLinearModels
Resolving package versions...
Installed PyCall ───────────── v1.91.2
Installed LazyArrays ───────── v0.14.10
Installed RCall ────────────── v0.13.4
Installed WinReg ───────────── v0.3.1
Installed MacroTools ───────── v0.5.2
Installed FileIO ───────────── v1.1.0
Installed Mocking ──────────── v0.7.0
Installed RData ────────────── v0.6.3
Installed ArrayLayouts ─────── v0.1.5
Installed ShiftedArrays ────── v1.0.0
Installed EzXML ────────────── v0.9.5
Installed StatsModels ──────── v0.6.7
Installed CodecZlib ────────── v0.6.0
Installed FilePathsBase ────── v0.7.0
Installed VersionParsing ───── v1.1.3
Installed TimeZones ────────── v0.10.3
Installed RDatasets ────────── v0.6.5
Installed Conda ────────────── v1.3.0
Installed CSV ──────────────── v0.5.18
Installed PooledArrays ─────── v0.5.2
Installed WeakRefStrings ───── v0.6.1
Installed TranscodingStreams ─ v0.9.5
Installed DataFrames ───────── v0.19.4
Building Conda ────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ───→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building RCall ────→ `~/.julia/packages/RCall/g7dhB/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1105
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:424
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/backwards_compatible_isolation.jl:649
Building EzXML ────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building TimeZones → `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_sECC4k/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[49dc2e85] Calculus v0.5.1
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[31c24e10] Distributions v0.21.9
[ffbed154] DocStringExtensions v0.8.1
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[41ab1584] InvertedIndices v1.0.0
[42fd0dbc] IterativeSolvers v0.8.1
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[7f8f8fb0] LearnBase v0.2.2
[d3d80556] LineSearches v7.0.1
[7a12625a] LinearMaps v2.5.2
[30fc2ffe] LossFunctions v0.5.1
[a7f614a8] MLJBase v0.8.4
[6ee0df7b] MLJLinearModels v0.2.1
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[1fd47b50] QuadGK v2.1.1
[6f49c342] RCall v0.13.4
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[321657f4] ScientificTypes v0.2.6
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
== UTILS ==
Test Summary: | Pass Total
Checks | 4 4
Test Summary: | Pass Total
Augment | 2 2
Test Summary: | Pass Total
Apply | 8 8
Test Summary: | Pass Total
Sigmoid | 13 13
Test Summary: | Pass Total
Hat matrix | 1 1
Test Summary: | Pass Total
Soft-thresh | 1 1
Test Summary: | Pass Total
Clip | 2 2
== LOSS-PENALTY ==
> generic <
Test Summary: | Pass Total
LPCost basics | 11 11
Test Summary: | Pass Total
Comp LPs | 30 30
Test Summary: | Pass Total
Compose | 19 19
Test Summary: | Pass Total
Logistic | 1 1
Test Summary: | Pass Total
Multinomial | 2 2
> utils <
Test Summary: | Pass Total
elastic net | 7 7
> robust <
Test Summary: | Pass Total
Robust Loss | 7 7
== GLR ==
> constructors <
Test Summary: | Pass Total
Constructors | 49 49
> utils <
Test Summary: | Pass Total
Tools | 2 2
Test Summary: | Pass Total
Objectives | 9 9
> grads-hess <
Test Summary: | Pass Total
GH> Ridge | 3 3
Test Summary: | Pass Total
GH> EN/Lasso | 8 8
Test Summary: | Pass Total
GH> LogitL2 | 12 12
Test Summary: | Pass Total
GH> MultinL2 | 6 6
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_)
Evaluated: 79.36959522807834 == 79.36959522807831
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_ .* maskint)
Evaluated: 74.49309469154164 == 74.49309469154166
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
Test Summary: | Pass Fail Total
GH> Huber | 11 2 13
ERROR: LoadError: LoadError: Some tests did not pass: 11 passed, 2 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:192
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/runtests.jl:13
ERROR: Package MLJLinearModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 6 minutes, 25 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed NaNMath ───────────────────── v0.3.3
Installed Tables ────────────────────── v0.2.11
Installed ColorTypes ────────────────── v0.8.0
Installed QuadGK ────────────────────── v2.1.1
Installed DataStructures ────────────── v0.17.6
Installed MLJLinearModels ───────────── v0.2.1
Installed IterativeSolvers ──────────── v0.8.1
Installed Optim ─────────────────────── v0.19.5
Installed FixedPointNumbers ─────────── v0.6.1
Installed Compat ────────────────────── v2.2.0
Installed SpecialFunctions ──────────── v0.8.0
Installed DiffResults ───────────────── v0.0.4
Installed MLJBase ───────────────────── v0.8.4
Installed StatsBase ─────────────────── v0.32.0
Installed StaticArrays ──────────────── v0.12.1
Installed BinDeps ───────────────────── v0.8.10
Installed FillArrays ────────────────── v0.8.2
Installed LineSearches ──────────────── v7.0.1
Installed ForwardDiff ───────────────── v0.10.7
Installed Arpack ────────────────────── v0.3.1
Installed Calculus ──────────────────── v0.5.1
Installed URIParser ─────────────────── v0.4.0
Installed Missings ──────────────────── v0.4.3
Installed LossFunctions ─────────────── v0.5.1
Installed TableTraits ───────────────── v1.0.0
Installed CommonSubexpressions ──────── v0.2.0
Installed LinearMaps ────────────────── v2.5.2
Installed StatsFuns ─────────────────── v0.9.0
Installed BinaryProvider ────────────── v0.5.8
Installed Parameters ────────────────── v0.12.0
Installed DocStringExtensions ───────── v0.8.1
Installed NLSolversBase ─────────────── v7.5.0
Installed ScientificTypes ───────────── v0.2.6
Installed Rmath ─────────────────────── v0.5.1
Installed DiffRules ─────────────────── v0.1.0
Installed Requires ──────────────────── v0.5.2
Installed InvertedIndices ───────────── v1.0.0
Installed PositiveFactorizations ────── v0.2.3
Installed ArrayInterface ────────────── v2.0.0
Installed Distributions ─────────────── v0.21.9
Installed DataValueInterfaces ───────── v1.0.0
Installed CategoricalArrays ─────────── v0.7.3
Installed Reexport ──────────────────── v0.2.0
Installed DataAPI ───────────────────── v1.1.0
Installed RecipesBase ───────────────── v0.7.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed LearnBase ─────────────────── v0.2.2
Installed PDMats ────────────────────── v0.9.10
Installed JSON ──────────────────────── v0.21.0
Installed DiffEqDiffTools ───────────── v1.5.0
Installed OrderedCollections ────────── v1.1.0
Installed Parsers ───────────────────── v0.3.10
Installed SortingAlgorithms ─────────── v0.3.1
Updating `~/.julia/environments/v1.3/Project.toml`
[6ee0df7b] + MLJLinearModels v0.2.1
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[324d7699] + CategoricalArrays v0.7.3
[3da002f7] + ColorTypes v0.8.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[31c24e10] + Distributions v0.21.9
[ffbed154] + DocStringExtensions v0.8.1
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[41ab1584] + InvertedIndices v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[7f8f8fb0] + LearnBase v0.2.2
[d3d80556] + LineSearches v7.0.1
[7a12625a] + LinearMaps v2.5.2
[30fc2ffe] + LossFunctions v0.5.1
[a7f614a8] + MLJBase v0.8.4
[6ee0df7b] + MLJLinearModels v0.2.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[321657f4] + ScientificTypes v0.2.6
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Testing MLJLinearModels
Resolving package versions...
Installed Conda ────────────── v1.3.0
Installed PyCall ───────────── v1.91.2
Installed RCall ────────────── v0.13.4
Installed ArrayLayouts ─────── v0.1.5
Installed WeakRefStrings ───── v0.6.1
Installed RData ────────────── v0.6.3
Installed TimeZones ────────── v0.10.3
Installed LazyArrays ───────── v0.14.10
Installed StatsModels ──────── v0.6.7
Installed CodecZlib ────────── v0.6.0
Installed MacroTools ───────── v0.5.2
Installed DataFrames ───────── v0.19.4
Installed Mocking ──────────── v0.7.0
Installed FileIO ───────────── v1.1.0
Installed WinReg ───────────── v0.3.1
Installed FilePathsBase ────── v0.7.0
Installed PooledArrays ─────── v0.5.2
Installed EzXML ────────────── v0.9.5
Installed ShiftedArrays ────── v1.0.0
Installed TranscodingStreams ─ v0.9.5
Installed VersionParsing ───── v1.1.3
Installed RDatasets ────────── v0.6.5
Installed CSV ──────────────── v0.5.18
Building Conda ────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ───→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building RCall ────→ `~/.julia/packages/RCall/g7dhB/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1105
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:424
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/backwards_compatible_isolation.jl:649
Building EzXML ────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building TimeZones → `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_4MMvz6/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[49dc2e85] Calculus v0.5.1
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[31c24e10] Distributions v0.21.9
[ffbed154] DocStringExtensions v0.8.1
[8f5d6c58] EzXML v0.9.5
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[41ab1584] InvertedIndices v1.0.0
[42fd0dbc] IterativeSolvers v0.8.1
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[7f8f8fb0] LearnBase v0.2.2
[d3d80556] LineSearches v7.0.1
[7a12625a] LinearMaps v2.5.2
[30fc2ffe] LossFunctions v0.5.1
[a7f614a8] MLJBase v0.8.4
[6ee0df7b] MLJLinearModels v0.2.1
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.0
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[1fd47b50] QuadGK v2.1.1
[6f49c342] RCall v0.13.4
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.5
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[321657f4] ScientificTypes v0.2.6
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v0.10.3
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
== UTILS ==
Test Summary: | Pass Total
Checks | 4 4
Test Summary: | Pass Total
Augment | 2 2
Test Summary: | Pass Total
Apply | 8 8
Test Summary: | Pass Total
Sigmoid | 13 13
Test Summary: | Pass Total
Hat matrix | 1 1
Test Summary: | Pass Total
Soft-thresh | 1 1
Test Summary: | Pass Total
Clip | 2 2
== LOSS-PENALTY ==
> generic <
Test Summary: | Pass Total
LPCost basics | 11 11
Test Summary: | Pass Total
Comp LPs | 30 30
Test Summary: | Pass Total
Compose | 19 19
Test Summary: | Pass Total
Logistic | 1 1
Test Summary: | Pass Total
Multinomial | 2 2
> utils <
Test Summary: | Pass Total
elastic net | 7 7
> robust <
Test Summary: | Pass Total
Robust Loss | 7 7
== GLR ==
> constructors <
Test Summary: | Pass Total
Constructors | 49 49
> utils <
Test Summary: | Pass Total
Tools | 2 2
Test Summary: | Pass Total
Objectives | 9 9
> grads-hess <
Test Summary: | Pass Total
GH> Ridge | 3 3
Test Summary: | Pass Total
GH> EN/Lasso | 8 8
Test Summary: | Pass Total
GH> LogitL2 | 12 12
Test Summary: | Pass Total
GH> MultinL2 | 6 6
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_)
Evaluated: 79.36959522807834 == 79.36959522807831
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:246
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
GH> Huber: Test Failed at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
Expression: f1 == hlr1.loss(r1) + hlr1.penalty(θ1_ .* maskint)
Evaluated: 74.49309469154164 == 74.49309469154166
Stacktrace:
[1] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:269
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:193
Test Summary: | Pass Fail Total
GH> Huber | 11 2 13
ERROR: LoadError: LoadError: Some tests did not pass: 11 passed, 2 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/glr/grad-hess-prox.jl:192
in expression starting at /root/.julia/packages/MLJLinearModels/nEQIy/test/runtests.jl:13
ERROR: Package MLJLinearModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10