If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was successful .
Last evaluation was ago and took 12 minutes, 6 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Missings ─────────────── v0.4.3
Installed DataAPI ──────────────── v1.1.0
Installed PDMats ───────────────── v0.9.10
Installed AbstractFFTs ─────────── v0.5.0
Installed FileIO ───────────────── v1.1.0
Installed NearestNeighbors ─────── v0.4.4
Installed LineSearches ─────────── v7.0.1
Installed Kpax3 ────────────────── v0.5.2
Installed BinaryProvider ───────── v0.5.8
Installed Conda ────────────────── v1.3.0
Installed CommonSubexpressions ─── v0.2.0
Installed URIParser ────────────── v0.4.0
Installed JLD2 ─────────────────── v0.1.9
Installed AxisAlgorithms ───────── v1.0.0
Installed StatsBase ────────────── v0.32.0
Installed StatsFuns ────────────── v0.9.0
Installed Requires ─────────────── v0.5.2
Installed Reexport ─────────────── v0.2.0
Installed NLSolversBase ────────── v7.5.0
Installed OrderedCollections ───── v1.1.0
Installed OffsetArrays ─────────── v0.11.2
Installed Compat ───────────────── v2.2.0
Installed ForwardDiff ──────────── v0.10.7
Installed Rmath ────────────────── v0.5.1
Installed Calculus ─────────────── v0.5.1
Installed RecipesBase ──────────── v0.7.0
Installed Parsers ──────────────── v0.3.10
Installed DataStructures ───────── v0.17.6
Installed DiffRules ────────────── v0.1.0
Installed KernelDensity ────────── v0.5.1
Installed FillArrays ───────────── v0.8.2
Installed TranscodingStreams ───── v0.9.5
Installed DiffEqDiffTools ──────── v1.5.0
Installed Distributions ────────── v0.21.9
Installed CodecZlib ────────────── v0.6.0
Installed Ratios ───────────────── v0.3.1
Installed JSON ─────────────────── v0.21.0
Installed ArrayInterface ───────── v2.0.0
Installed DiffResults ──────────── v0.0.4
Installed NaNMath ──────────────── v0.3.3
Installed StaticArrays ─────────── v0.12.1
Installed Interpolations ───────── v0.12.5
Installed Parameters ───────────── v0.12.0
Installed FFTW ─────────────────── v1.1.0
Installed QuadGK ───────────────── v2.1.1
Installed SortingAlgorithms ────── v0.3.1
Installed Distances ────────────── v0.8.2
Installed WoodburyMatrices ─────── v0.4.1
Installed VersionParsing ───────── v1.1.3
Installed PositiveFactorizations ─ v0.2.3
Installed SpecialFunctions ─────── v0.8.0
Installed Clustering ───────────── v0.13.3
Installed Arpack ───────────────── v0.3.1
Installed Optim ────────────────── v0.19.5
Installed BinDeps ──────────────── v0.8.10
Updating `~/.julia/environments/v1.2/Project.toml`
[ad72c4b6] + Kpax3 v0.5.2
Updating `~/.julia/environments/v1.2/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[13072b0f] + AxisAlgorithms v1.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[aaaa29a8] + Clustering v0.13.3
[944b1d66] + CodecZlib v0.6.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[7a1cc6ca] + FFTW v1.1.0
[5789e2e9] + FileIO v1.1.0
[1a297f60] + FillArrays v0.8.2
[f6369f11] + ForwardDiff v0.10.7
[a98d9a8b] + Interpolations v0.12.5
[033835bb] + JLD2 v0.1.9
[682c06a0] + JSON v0.21.0
[5ab0869b] + KernelDensity v0.5.1
[ad72c4b6] + Kpax3 v0.5.2
[d3d80556] + LineSearches v7.0.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[b8a86587] + NearestNeighbors v0.4.4
[6fe1bfb0] + OffsetArrays v0.11.2
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[c84ed2f1] + Ratios v0.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[efce3f68] + WoodburyMatrices v0.4.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Testing Kpax3
Resolving package versions...
Installed Showoff ─────────── v0.3.1
Installed FixedPointNumbers ─ v0.6.1
Installed FFMPEG ──────────── v0.2.3
Installed Measures ────────── v0.3.0
Installed Plots ───────────── v0.28.2
Installed Contour ─────────── v0.5.1
Installed IterTools ───────── v1.3.0
Installed Colors ──────────── v0.9.6
Installed GeometryTypes ───── v0.7.6
Installed PlotUtils ───────── v0.6.1
Installed PlotThemes ──────── v1.0.0
Installed ColorTypes ──────── v0.8.0
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_4ko7u8/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[13072b0f] AxisAlgorithms v1.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[49dc2e85] Calculus v0.5.1
[aaaa29a8] Clustering v0.13.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[c87230d0] FFMPEG v0.2.3
[7a1cc6ca] FFTW v1.1.0
[5789e2e9] FileIO v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[a98d9a8b] Interpolations v0.12.5
[c8e1da08] IterTools v1.3.0
[033835bb] JLD2 v0.1.9
[682c06a0] JSON v0.21.0
[5ab0869b] KernelDensity v0.5.1
[ad72c4b6] Kpax3 v0.5.2
[d3d80556] LineSearches v7.0.1
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[b8a86587] NearestNeighbors v0.4.4
[6fe1bfb0] OffsetArrays v0.11.2
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[85a6dd25] PositiveFactorizations v0.2.3
[1fd47b50] QuadGK v2.1.1
[c84ed2f1] Ratios v0.3.1
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[efce3f68] WoodburyMatrices v0.4.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Going through tests in 'data_processing/fasta_data_processing.jl'... PASSED!
Going through tests in 'data_processing/csv_data_processing.jl'... PASSED!
Going through tests in 'distances/simovici_jaroszewicz.jl'... PASSED!
Going through tests in 'distances/jaccard.jl'... PASSED!
Going through tests in 'misc/basic_functions.jl'... PASSED!
Going through tests in 'misc/partition_functions.jl'... PASSED!
Going through tests in 'types/settings.jl'... PASSED!
Going through tests in 'types/data.jl'... PASSED!
Going through tests in 'types/prior_col.jl'... PASSED!
Going through tests in 'types/prior_row.jl'... PASSED!
Going through tests in 'types/state.jl'... PASSED!
Going through tests in 'types/state_list.jl'... PASSED!
Going through tests in 'types/support.jl'... PASSED!
Going through tests in 'model/likelihoods.jl'... PASSED!
Going through tests in 'model/partition_cols.jl'... PASSED!
Going through tests in 'model/partition_rows.jl'... PASSED!
Going through tests in 'model/loss_binder.jl'... PASSED!
Going through tests in 'optimizer/local_mode.jl'... PASSED!
Going through tests in 'optimizer/selection.jl'... PASSED!
Going through tests in 'optimizer/crossover.jl'... PASSED!
Going through tests in 'optimizer/mutation.jl'... PASSED!
Going through tests in 'mcmc/partition_ratios.jl'... PASSED!
Going through tests in 'mcmc/log_likelihoods.jl'... PASSED!
Going through tests in 'mcmc/weight.jl'... PASSED!
Going through tests in 'mcmc/merge.jl'... PASSED!
Going through tests in 'mcmc/split.jl'... PASSED!
Going through tests in 'mcmc/gibbs.jl'... PASSED!
Going through tests in 'mcmc/biased_random_walk.jl'... PASSED!
Going through tests in 'mcmc/posterior.jl'... PASSED!
Going through tests in 'mcmc/diagnostics.jl'... PASSED!
Going through tests in 'estimate/write.jl'... PASSED!
Going through tests in 'plots/plots.jl'... PASSED!
Testing Kpax3 tests passed
Results with Julia v1.3.0
Testing was successful .
Last evaluation was ago and took 15 minutes, 50 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed KernelDensity ────────── v0.5.1
Installed Ratios ───────────────── v0.3.1
Installed URIParser ────────────── v0.4.0
Installed SortingAlgorithms ────── v0.3.1
Installed DiffResults ──────────── v0.0.4
Installed Arpack ───────────────── v0.3.1
Installed DataStructures ───────── v0.17.6
Installed Kpax3 ────────────────── v0.5.2
Installed AxisAlgorithms ───────── v1.0.0
Installed JLD2 ─────────────────── v0.1.9
Installed QuadGK ───────────────── v2.1.1
Installed LineSearches ─────────── v7.0.1
Installed StaticArrays ─────────── v0.12.1
Installed FFTW ─────────────────── v1.1.0
Installed BinaryProvider ───────── v0.5.8
Installed FileIO ───────────────── v1.1.0
Installed Compat ───────────────── v2.2.0
Installed StatsFuns ────────────── v0.9.0
Installed NLSolversBase ────────── v7.5.0
Installed Missings ─────────────── v0.4.3
Installed NearestNeighbors ─────── v0.4.4
Installed Parsers ──────────────── v0.3.10
Installed Rmath ────────────────── v0.5.1
Installed Parameters ───────────── v0.12.0
Installed PositiveFactorizations ─ v0.2.3
Installed Distributions ────────── v0.21.9
Installed OrderedCollections ───── v1.1.0
Installed SpecialFunctions ─────── v0.8.0
Installed JSON ─────────────────── v0.21.0
Installed BinDeps ──────────────── v0.8.10
Installed CommonSubexpressions ─── v0.2.0
Installed RecipesBase ──────────── v0.7.0
Installed DataAPI ──────────────── v1.1.0
Installed Distances ────────────── v0.8.2
Installed NaNMath ──────────────── v0.3.3
Installed ForwardDiff ──────────── v0.10.7
Installed DiffRules ────────────── v0.1.0
Installed Optim ────────────────── v0.19.5
Installed DiffEqDiffTools ──────── v1.5.0
Installed Calculus ─────────────── v0.5.1
Installed ArrayInterface ───────── v2.0.0
Installed Interpolations ───────── v0.12.5
Installed Requires ─────────────── v0.5.2
Installed Conda ────────────────── v1.3.0
Installed CodecZlib ────────────── v0.6.0
Installed VersionParsing ───────── v1.1.3
Installed FillArrays ───────────── v0.8.2
Installed OffsetArrays ─────────── v0.11.2
Installed TranscodingStreams ───── v0.9.5
Installed Reexport ─────────────── v0.2.0
Installed WoodburyMatrices ─────── v0.4.1
Installed AbstractFFTs ─────────── v0.5.0
Installed Clustering ───────────── v0.13.3
Installed PDMats ───────────────── v0.9.10
Installed StatsBase ────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[ad72c4b6] + Kpax3 v0.5.2
Updating `~/.julia/environments/v1.3/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[13072b0f] + AxisAlgorithms v1.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[aaaa29a8] + Clustering v0.13.3
[944b1d66] + CodecZlib v0.6.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[7a1cc6ca] + FFTW v1.1.0
[5789e2e9] + FileIO v1.1.0
[1a297f60] + FillArrays v0.8.2
[f6369f11] + ForwardDiff v0.10.7
[a98d9a8b] + Interpolations v0.12.5
[033835bb] + JLD2 v0.1.9
[682c06a0] + JSON v0.21.0
[5ab0869b] + KernelDensity v0.5.1
[ad72c4b6] + Kpax3 v0.5.2
[d3d80556] + LineSearches v7.0.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[b8a86587] + NearestNeighbors v0.4.4
[6fe1bfb0] + OffsetArrays v0.11.2
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[c84ed2f1] + Ratios v0.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[efce3f68] + WoodburyMatrices v0.4.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Testing Kpax3
Resolving package versions...
Installed IterTools ───────── v1.3.0
Installed FixedPointNumbers ─ v0.6.1
Installed Showoff ─────────── v0.3.1
Installed Colors ──────────── v0.9.6
Installed ColorTypes ──────── v0.8.0
Installed PlotThemes ──────── v1.0.0
Installed Plots ───────────── v0.28.2
Installed PlotUtils ───────── v0.6.1
Installed Measures ────────── v0.3.0
Installed FFMPEG ──────────── v0.2.3
Installed GeometryTypes ───── v0.7.6
Installed Contour ─────────── v0.5.1
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_p92tf9/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[13072b0f] AxisAlgorithms v1.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[49dc2e85] Calculus v0.5.1
[aaaa29a8] Clustering v0.13.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[c87230d0] FFMPEG v0.2.3
[7a1cc6ca] FFTW v1.1.0
[5789e2e9] FileIO v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[a98d9a8b] Interpolations v0.12.5
[c8e1da08] IterTools v1.3.0
[033835bb] JLD2 v0.1.9
[682c06a0] JSON v0.21.0
[5ab0869b] KernelDensity v0.5.1
[ad72c4b6] Kpax3 v0.5.2
[d3d80556] LineSearches v7.0.1
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[b8a86587] NearestNeighbors v0.4.4
[6fe1bfb0] OffsetArrays v0.11.2
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[85a6dd25] PositiveFactorizations v0.2.3
[1fd47b50] QuadGK v2.1.1
[c84ed2f1] Ratios v0.3.1
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[efce3f68] WoodburyMatrices v0.4.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Going through tests in 'data_processing/fasta_data_processing.jl'... PASSED!
Going through tests in 'data_processing/csv_data_processing.jl'... PASSED!
Going through tests in 'distances/simovici_jaroszewicz.jl'... PASSED!
Going through tests in 'distances/jaccard.jl'... PASSED!
Going through tests in 'misc/basic_functions.jl'... PASSED!
Going through tests in 'misc/partition_functions.jl'... PASSED!
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Going through tests in 'types/state.jl'... PASSED!
Going through tests in 'types/state_list.jl'... PASSED!
Going through tests in 'types/support.jl'... PASSED!
Going through tests in 'model/likelihoods.jl'... PASSED!
Going through tests in 'model/partition_cols.jl'... PASSED!
Going through tests in 'model/partition_rows.jl'... PASSED!
Going through tests in 'model/loss_binder.jl'... PASSED!
Going through tests in 'optimizer/local_mode.jl'... PASSED!
Going through tests in 'optimizer/selection.jl'... PASSED!
Going through tests in 'optimizer/crossover.jl'... PASSED!
Going through tests in 'optimizer/mutation.jl'... PASSED!
Going through tests in 'mcmc/partition_ratios.jl'... PASSED!
Going through tests in 'mcmc/log_likelihoods.jl'... PASSED!
Going through tests in 'mcmc/weight.jl'... PASSED!
Going through tests in 'mcmc/merge.jl'... PASSED!
Going through tests in 'mcmc/split.jl'... PASSED!
Going through tests in 'mcmc/gibbs.jl'... PASSED!
Going through tests in 'mcmc/biased_random_walk.jl'... PASSED!
Going through tests in 'mcmc/posterior.jl'... PASSED!
Going through tests in 'mcmc/diagnostics.jl'... PASSED!
Going through tests in 'estimate/write.jl'... PASSED!
Going through tests in 'plots/plots.jl'... PASSED!
Testing Kpax3 tests passed
Results with Julia v1.3.1-pre-7704df0a5a
Testing was successful .
Last evaluation was ago and took 16 minutes, 25 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed NaNMath ──────────────── v0.3.3
Installed Ratios ───────────────── v0.3.1
Installed Conda ────────────────── v1.3.0
Installed QuadGK ───────────────── v2.1.1
Installed DataStructures ───────── v0.17.6
Installed SpecialFunctions ─────── v0.8.0
Installed Kpax3 ────────────────── v0.5.2
Installed Optim ────────────────── v0.19.5
Installed Compat ───────────────── v2.2.0
Installed BinDeps ──────────────── v0.8.10
Installed FillArrays ───────────── v0.8.2
Installed StaticArrays ─────────── v0.12.1
Installed AxisAlgorithms ───────── v1.0.0
Installed ForwardDiff ──────────── v0.10.7
Installed StatsBase ────────────── v0.32.0
Installed OffsetArrays ─────────── v0.11.2
Installed DiffResults ──────────── v0.0.4
Installed Arpack ───────────────── v0.3.1
Installed LineSearches ─────────── v7.0.1
Installed Calculus ─────────────── v0.5.1
Installed FileIO ───────────────── v1.1.0
Installed URIParser ────────────── v0.4.0
Installed CodecZlib ────────────── v0.6.0
Installed FFTW ─────────────────── v1.1.0
Installed CommonSubexpressions ─── v0.2.0
Installed StatsFuns ────────────── v0.9.0
Installed Missings ─────────────── v0.4.3
Installed TranscodingStreams ───── v0.9.5
Installed BinaryProvider ───────── v0.5.8
Installed NLSolversBase ────────── v7.5.0
Installed Rmath ────────────────── v0.5.1
Installed Parameters ───────────── v0.12.0
Installed DiffRules ────────────── v0.1.0
Installed Requires ─────────────── v0.5.2
Installed Interpolations ───────── v0.12.5
Installed AbstractFFTs ─────────── v0.5.0
Installed ArrayInterface ───────── v2.0.0
Installed Distances ────────────── v0.8.2
Installed KernelDensity ────────── v0.5.1
Installed Reexport ─────────────── v0.2.0
Installed PositiveFactorizations ─ v0.2.3
Installed RecipesBase ──────────── v0.7.0
Installed Distributions ────────── v0.21.9
Installed WoodburyMatrices ─────── v0.4.1
Installed DataAPI ──────────────── v1.1.0
Installed JSON ─────────────────── v0.21.0
Installed Clustering ───────────── v0.13.3
Installed PDMats ───────────────── v0.9.10
Installed JLD2 ─────────────────── v0.1.9
Installed OrderedCollections ───── v1.1.0
Installed DiffEqDiffTools ──────── v1.5.0
Installed Parsers ──────────────── v0.3.10
Installed NearestNeighbors ─────── v0.4.4
Installed SortingAlgorithms ────── v0.3.1
Installed VersionParsing ───────── v1.1.3
Updating `~/.julia/environments/v1.3/Project.toml`
[ad72c4b6] + Kpax3 v0.5.2
Updating `~/.julia/environments/v1.3/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[7d9fca2a] + Arpack v0.3.1
[4fba245c] + ArrayInterface v2.0.0
[13072b0f] + AxisAlgorithms v1.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[49dc2e85] + Calculus v0.5.1
[aaaa29a8] + Clustering v0.13.3
[944b1d66] + CodecZlib v0.6.0
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[b4f34e82] + Distances v0.8.2
[31c24e10] + Distributions v0.21.9
[7a1cc6ca] + FFTW v1.1.0
[5789e2e9] + FileIO v1.1.0
[1a297f60] + FillArrays v0.8.2
[f6369f11] + ForwardDiff v0.10.7
[a98d9a8b] + Interpolations v0.12.5
[033835bb] + JLD2 v0.1.9
[682c06a0] + JSON v0.21.0
[5ab0869b] + KernelDensity v0.5.1
[ad72c4b6] + Kpax3 v0.5.2
[d3d80556] + LineSearches v7.0.1
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[b8a86587] + NearestNeighbors v0.4.4
[6fe1bfb0] + OffsetArrays v0.11.2
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[1fd47b50] + QuadGK v2.1.1
[c84ed2f1] + Ratios v0.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3bb67fe8] + TranscodingStreams v0.9.5
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[efce3f68] + WoodburyMatrices v0.4.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building CodecZlib ───────→ `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Testing Kpax3
Resolving package versions...
Installed FixedPointNumbers ─ v0.6.1
Installed ColorTypes ──────── v0.8.0
Installed Plots ───────────── v0.28.2
Installed Showoff ─────────── v0.3.1
Installed IterTools ───────── v1.3.0
Installed FFMPEG ──────────── v0.2.3
Installed Colors ──────────── v0.9.6
Installed GeometryTypes ───── v0.7.6
Installed PlotThemes ──────── v1.0.0
Installed Measures ────────── v0.3.0
Installed PlotUtils ───────── v0.6.1
Installed Contour ─────────── v0.5.1
Installed GR ──────────────── v0.44.0
Building GR ────→ `~/.julia/packages/GR/oiZD3/deps/build.log`
Building FFMPEG → `~/.julia/packages/FFMPEG/bkWgb/deps/build.log`
Building Plots ─→ `~/.julia/packages/Plots/2KhB2/deps/build.log`
Status `/tmp/jl_a1BiGQ/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[7d9fca2a] Arpack v0.3.1
[4fba245c] ArrayInterface v2.0.0
[13072b0f] AxisAlgorithms v1.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[49dc2e85] Calculus v0.5.1
[aaaa29a8] Clustering v0.13.3
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[d38c429a] Contour v0.5.1
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.9
[c87230d0] FFMPEG v0.2.3
[7a1cc6ca] FFTW v1.1.0
[5789e2e9] FileIO v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[28b8d3ca] GR v0.44.0
[4d00f742] GeometryTypes v0.7.6
[a98d9a8b] Interpolations v0.12.5
[c8e1da08] IterTools v1.3.0
[033835bb] JLD2 v0.1.9
[682c06a0] JSON v0.21.0
[5ab0869b] KernelDensity v0.5.1
[ad72c4b6] Kpax3 v0.5.2
[d3d80556] LineSearches v7.0.1
[442fdcdd] Measures v0.3.0
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[77ba4419] NaNMath v0.3.3
[b8a86587] NearestNeighbors v0.4.4
[6fe1bfb0] OffsetArrays v0.11.2
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[ccf2f8ad] PlotThemes v1.0.0
[995b91a9] PlotUtils v0.6.1
[91a5bcdd] Plots v0.28.2
[85a6dd25] PositiveFactorizations v0.2.3
[1fd47b50] QuadGK v2.1.1
[c84ed2f1] Ratios v0.3.1
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[efce3f68] WoodburyMatrices v0.4.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Going through tests in 'data_processing/fasta_data_processing.jl'... PASSED!
Going through tests in 'data_processing/csv_data_processing.jl'... PASSED!
Going through tests in 'distances/simovici_jaroszewicz.jl'... PASSED!
Going through tests in 'distances/jaccard.jl'... PASSED!
Going through tests in 'misc/basic_functions.jl'... PASSED!
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Going through tests in 'model/loss_binder.jl'... PASSED!
Going through tests in 'optimizer/local_mode.jl'... PASSED!
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Going through tests in 'optimizer/crossover.jl'... PASSED!
Going through tests in 'optimizer/mutation.jl'... PASSED!
Going through tests in 'mcmc/partition_ratios.jl'... PASSED!
Going through tests in 'mcmc/log_likelihoods.jl'... PASSED!
Going through tests in 'mcmc/weight.jl'... PASSED!
Going through tests in 'mcmc/merge.jl'... PASSED!
Going through tests in 'mcmc/split.jl'... PASSED!
Going through tests in 'mcmc/gibbs.jl'... PASSED!
Going through tests in 'mcmc/biased_random_walk.jl'... PASSED!
Going through tests in 'mcmc/posterior.jl'... PASSED!
Going through tests in 'mcmc/diagnostics.jl'... PASSED!
Going through tests in 'estimate/write.jl'... PASSED!
Going through tests in 'plots/plots.jl'... PASSED!
Testing Kpax3 tests passed