Granular

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If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl, making sure to read the FAQ first.

Results with Julia v1.2.0

Testing was unsuccessful: testing failed for unknown reasons. Last evaluation was ago and took 1 minute, 57 seconds.

Click here to download the log file. 

 Resolving package versions...
 Installed WriteVTK ─────────── v1.2.2
 Installed LightXML ─────────── v0.8.1
 Installed JLD2 ─────────────── v0.1.9
 Installed CodecZlib ────────── v0.6.0
 Installed TranscodingStreams ─ v0.9.5
 Installed DataStructures ───── v0.17.6
 Installed BinaryProvider ───── v0.5.8
 Installed Granular ─────────── v0.4.3
 Installed OrderedCollections ─ v1.1.0
 Installed FileIO ───────────── v1.1.0
  Updating `~/.julia/environments/v1.2/Project.toml`
  [f5c4805d] + Granular v0.4.3
  Updating `~/.julia/environments/v1.2/Manifest.toml`
  [b99e7846] + BinaryProvider v0.5.8
  [944b1d66] + CodecZlib v0.6.0
  [864edb3b] + DataStructures v0.17.6
  [5789e2e9] + FileIO v1.1.0
  [f5c4805d] + Granular v0.4.3
  [033835bb] + JLD2 v0.1.9
  [9c8b4983] + LightXML v0.8.1
  [bac558e1] + OrderedCollections v1.1.0
  [3bb67fe8] + TranscodingStreams v0.9.5
  [64499a7a] + WriteVTK v1.2.2
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8bb1440f] + DelimitedFiles 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [76f85450] + LibGit2 
  [8f399da3] + Libdl 
  [37e2e46d] + LinearAlgebra 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [44cfe95a] + Pkg 
  [de0858da] + Printf 
  [3fa0cd96] + REPL 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [cf7118a7] + UUIDs 
  [4ec0a83e] + Unicode 
  Building LightXML ─→ `~/.julia/packages/LightXML/W8FVT/deps/build.log`
  Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
   Testing Granular
    Status `/tmp/jl_8Cs73w/Manifest.toml`
  [b99e7846] BinaryProvider v0.5.8
  [944b1d66] CodecZlib v0.6.0
  [864edb3b] DataStructures v0.17.6
  [5789e2e9] FileIO v1.1.0
  [f5c4805d] Granular v0.4.3
  [033835bb] JLD2 v0.1.9
  [9c8b4983] LightXML v0.8.1
  [bac558e1] OrderedCollections v1.1.0
  [3bb67fe8] TranscodingStreams v0.9.5
  [64499a7a] WriteVTK v1.2.2
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8bb1440f] DelimitedFiles  [`@stdlib/DelimitedFiles`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [76f85450] LibGit2  [`@stdlib/LibGit2`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [37e2e46d] LinearAlgebra  [`@stdlib/LinearAlgebra`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [44cfe95a] Pkg  [`@stdlib/Pkg`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [3fa0cd96] REPL  [`@stdlib/REPL`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [cf7118a7] UUIDs  [`@stdlib/UUIDs`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
┌ Warning: Package NetCDF not found. Ocean/atmosphere grid read not supported. If required, install NetCDF and its requirements with `Pkg.add("NetCDF")`.
└ @ Granular ~/.julia/packages/Granular/5nDVL/src/ocean.jl:19
Info: #### compressive_failure.jl ####
[ Info: Testing compressive failure: uniaxial compression
[ Info: Testing compressive failure: shear
[ Info: Testing robustness of overlap calculations
Info: #### cohesion.jl ####
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: # Check contact age scheme
[ Info: # Check if bonds add tensile strength
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (both grains rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending I
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending II
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
Info: #### grain.jl ####
[ Info: Writing simple simulation to VTK file
  density:                 934.0 kg/m^3
  thickness:               1.0 m
  contact_radius:          10.0 m
  areal_radius:            10.0 m
  circumreference:         62.83185307179586 m
  horizontal_surface_area: 314.1592653589793 m^2
  side_surface_area:       62.83185307179586 m^2
  volume:                  314.1592653589793 m^3
  mass:                    293424.7538452867 kg
  moment_of_inertia:       1.4671237692264333e7 kg*m^2

  lin_pos: [0.0, 0.0, 0.0] m
  lin_vel: [0.0, 0.0, 0.0] m/s
  lin_acc: [0.0, 0.0, 0.0] m/s^2
  force:   [0.0, 0.0, 0.0] N

  external_body_force: [0.0, 0.0, 0.0] N

  ang_pos: [0.0, 0.0, 0.0] rad
  ang_vel: [0.0, 0.0, 0.0] rad/s
  ang_acc: [0.0, 0.0, 0.0] rad/s^2
  torque:  [0.0, 0.0, 0.0] N*m

  fixed:       false
  allow_x_acc: false
  allow_y_acc: false
  allow_z_acc: false
  rotating:    true
  enabled:     true

  k_n: 1.0e7 N/m
  k_t: 0.0 N/m
  γ_n: 0.0 N/(m/s)
  γ_t: 0.0 N/(m/s)
  μ_s: 0.4
  μ_d: 0.4

  E:                    2.0e7 Pa
  ν:                    0.185
  tensile_strength:     0.0 Pa
  shear_strength:       0.0 Pa
  strength_heal_rate:   Inf Pa/s
  fracture_toughness:   0.0 m^0.5 Pa

  c_o_v:  0.85
  c_o_h:  0.0005
  c_a_v:  0.4
  c_a_h:  0.00025

  pressure:   0.0 Pa
  n_contacts: 0
  contacts:   [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
  pos_ij:     Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  δ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  θ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  granular_stress:   [0.0, 0.0, 0.0] Pa
  ocean_stress:      [0.0, 0.0, 0.0] Pa
  atmosphere_stress: [0.0, 0.0, 0.0] Pa

  thermal_energy:    0.0 J

  color:  0

[ Info: Testing grain value checks 
[ Info: Testing grain comparison 
┌ Warning: Skipping plotting routines: Could not launch gnuplot process
└ @ Main ~/.julia/packages/Granular/5nDVL/test/grain.jl:37
[ Info: Testing external body force routines
[ Info: Testing zeroKinematics!()
Info: #### vtk.jl ####
[ Info: Writing simple simulation to VTK file
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vtu' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vts' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
Test Failed at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
  Expression: read(#= /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42 =# Core.@cmd("\$(cmd) \$(grainpath)\$(cmd_post)"), String) == grainchecksum
   Evaluated: "b1748cb82e8270d951d9c1acaea0d151f0a5c48a1255e75de350bf9bcbc15fe9  test/test.grains.1.vtu\n" == "a698c24d46d15db97bb4d77d11ef1381d6cdf6536606d5c6482b063f47a20f68  test/test.grains.1.vtu\n"
ERROR: LoadError: LoadError: There was an error during testing
in expression starting at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
in expression starting at /root/.julia/packages/Granular/5nDVL/test/runtests.jl:13
ERROR: Package Granular errored during testing
Stacktrace:
 [1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
 [2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
 [3] #test at ./none:0 [inlined]
 [4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
 [5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
 [6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
 [7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
 [8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
 [9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
 [10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
 [11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
 [12] top-level scope at none:10

Results with Julia v1.3.0

Testing was unsuccessful: testing failed for unknown reasons. Last evaluation was ago and took 2 minutes.

Click here to download the log file. 

 Resolving package versions...
 Installed CodecZlib ────────── v0.6.0
 Installed WriteVTK ─────────── v1.2.2
 Installed JLD2 ─────────────── v0.1.9
 Installed LightXML ─────────── v0.8.1
 Installed OrderedCollections ─ v1.1.0
 Installed TranscodingStreams ─ v0.9.5
 Installed DataStructures ───── v0.17.6
 Installed Granular ─────────── v0.4.3
 Installed BinaryProvider ───── v0.5.8
 Installed FileIO ───────────── v1.1.0
  Updating `~/.julia/environments/v1.3/Project.toml`
  [f5c4805d] + Granular v0.4.3
  Updating `~/.julia/environments/v1.3/Manifest.toml`
  [b99e7846] + BinaryProvider v0.5.8
  [944b1d66] + CodecZlib v0.6.0
  [864edb3b] + DataStructures v0.17.6
  [5789e2e9] + FileIO v1.1.0
  [f5c4805d] + Granular v0.4.3
  [033835bb] + JLD2 v0.1.9
  [9c8b4983] + LightXML v0.8.1
  [bac558e1] + OrderedCollections v1.1.0
  [3bb67fe8] + TranscodingStreams v0.9.5
  [64499a7a] + WriteVTK v1.2.2
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8bb1440f] + DelimitedFiles 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [76f85450] + LibGit2 
  [8f399da3] + Libdl 
  [37e2e46d] + LinearAlgebra 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [44cfe95a] + Pkg 
  [de0858da] + Printf 
  [3fa0cd96] + REPL 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [cf7118a7] + UUIDs 
  [4ec0a83e] + Unicode 
  Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
  Building LightXML ─→ `~/.julia/packages/LightXML/W8FVT/deps/build.log`
   Testing Granular
    Status `/tmp/jl_j4pcii/Manifest.toml`
  [b99e7846] BinaryProvider v0.5.8
  [944b1d66] CodecZlib v0.6.0
  [864edb3b] DataStructures v0.17.6
  [5789e2e9] FileIO v1.1.0
  [f5c4805d] Granular v0.4.3
  [033835bb] JLD2 v0.1.9
  [9c8b4983] LightXML v0.8.1
  [bac558e1] OrderedCollections v1.1.0
  [3bb67fe8] TranscodingStreams v0.9.5
  [64499a7a] WriteVTK v1.2.2
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8bb1440f] DelimitedFiles  [`@stdlib/DelimitedFiles`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [76f85450] LibGit2  [`@stdlib/LibGit2`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [37e2e46d] LinearAlgebra  [`@stdlib/LinearAlgebra`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [44cfe95a] Pkg  [`@stdlib/Pkg`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [3fa0cd96] REPL  [`@stdlib/REPL`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [cf7118a7] UUIDs  [`@stdlib/UUIDs`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
┌ Warning: Package NetCDF not found. Ocean/atmosphere grid read not supported. If required, install NetCDF and its requirements with `Pkg.add("NetCDF")`.
└ @ Granular ~/.julia/packages/Granular/5nDVL/src/ocean.jl:19
Info: #### compressive_failure.jl ####
[ Info: Testing compressive failure: uniaxial compression
[ Info: Testing compressive failure: shear
[ Info: Testing robustness of overlap calculations
Info: #### cohesion.jl ####
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: # Check contact age scheme
[ Info: # Check if bonds add tensile strength
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (both grains rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending I
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending II
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
Info: #### grain.jl ####
[ Info: Writing simple simulation to VTK file
  density:                 934.0 kg/m^3
  thickness:               1.0 m
  contact_radius:          10.0 m
  areal_radius:            10.0 m
  circumreference:         62.83185307179586 m
  horizontal_surface_area: 314.1592653589793 m^2
  side_surface_area:       62.83185307179586 m^2
  volume:                  314.1592653589793 m^3
  mass:                    293424.7538452867 kg
  moment_of_inertia:       1.4671237692264333e7 kg*m^2

  lin_pos: [0.0, 0.0, 0.0] m
  lin_vel: [0.0, 0.0, 0.0] m/s
  lin_acc: [0.0, 0.0, 0.0] m/s^2
  force:   [0.0, 0.0, 0.0] N

  external_body_force: [0.0, 0.0, 0.0] N

  ang_pos: [0.0, 0.0, 0.0] rad
  ang_vel: [0.0, 0.0, 0.0] rad/s
  ang_acc: [0.0, 0.0, 0.0] rad/s^2
  torque:  [0.0, 0.0, 0.0] N*m

  fixed:       false
  allow_x_acc: false
  allow_y_acc: false
  allow_z_acc: false
  rotating:    true
  enabled:     true

  k_n: 1.0e7 N/m
  k_t: 0.0 N/m
  γ_n: 0.0 N/(m/s)
  γ_t: 0.0 N/(m/s)
  μ_s: 0.4
  μ_d: 0.4

  E:                    2.0e7 Pa
  ν:                    0.185
  tensile_strength:     0.0 Pa
  shear_strength:       0.0 Pa
  strength_heal_rate:   Inf Pa/s
  fracture_toughness:   0.0 m^0.5 Pa

  c_o_v:  0.85
  c_o_h:  0.0005
  c_a_v:  0.4
  c_a_h:  0.00025

  pressure:   0.0 Pa
  n_contacts: 0
  contacts:   [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
  pos_ij:     Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  δ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  θ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  granular_stress:   [0.0, 0.0, 0.0] Pa
  ocean_stress:      [0.0, 0.0, 0.0] Pa
  atmosphere_stress: [0.0, 0.0, 0.0] Pa

  thermal_energy:    0.0 J

  color:  0

[ Info: Testing grain value checks 
[ Info: Testing grain comparison 
┌ Warning: Skipping plotting routines: Could not launch gnuplot process
└ @ Main ~/.julia/packages/Granular/5nDVL/test/grain.jl:37
[ Info: Testing external body force routines
[ Info: Testing zeroKinematics!()
Info: #### vtk.jl ####
[ Info: Writing simple simulation to VTK file
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vtu' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vts' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
Test Failed at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
  Expression: read(#= /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42 =# Core.@cmd("\$(cmd) \$(grainpath)\$(cmd_post)"), String) == grainchecksum
   Evaluated: "b1748cb82e8270d951d9c1acaea0d151f0a5c48a1255e75de350bf9bcbc15fe9  test/test.grains.1.vtu\n" == "a698c24d46d15db97bb4d77d11ef1381d6cdf6536606d5c6482b063f47a20f68  test/test.grains.1.vtu\n"
ERROR: LoadError: LoadError: There was an error during testing
in expression starting at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
in expression starting at /root/.julia/packages/Granular/5nDVL/test/runtests.jl:13
ERROR: Package Granular errored during testing
Stacktrace:
 [1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
 [2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
 [3] #test at ./none:0 [inlined]
 [4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
 [5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
 [6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
 [7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
 [8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
 [9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
 [10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
 [11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
 [12] top-level scope at none:10

Results with Julia v1.3.1-pre-7704df0a5a

Testing was unsuccessful: testing failed for unknown reasons. Last evaluation was ago and took 2 minutes, 1 second.

Click here to download the log file. 

 Resolving package versions...
 Installed WriteVTK ─────────── v1.2.2
 Installed JLD2 ─────────────── v0.1.9
 Installed FileIO ───────────── v1.1.0
 Installed OrderedCollections ─ v1.1.0
 Installed TranscodingStreams ─ v0.9.5
 Installed DataStructures ───── v0.17.6
 Installed BinaryProvider ───── v0.5.8
 Installed Granular ─────────── v0.4.3
 Installed LightXML ─────────── v0.8.1
 Installed CodecZlib ────────── v0.6.0
  Updating `~/.julia/environments/v1.3/Project.toml`
  [f5c4805d] + Granular v0.4.3
  Updating `~/.julia/environments/v1.3/Manifest.toml`
  [b99e7846] + BinaryProvider v0.5.8
  [944b1d66] + CodecZlib v0.6.0
  [864edb3b] + DataStructures v0.17.6
  [5789e2e9] + FileIO v1.1.0
  [f5c4805d] + Granular v0.4.3
  [033835bb] + JLD2 v0.1.9
  [9c8b4983] + LightXML v0.8.1
  [bac558e1] + OrderedCollections v1.1.0
  [3bb67fe8] + TranscodingStreams v0.9.5
  [64499a7a] + WriteVTK v1.2.2
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8bb1440f] + DelimitedFiles 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [76f85450] + LibGit2 
  [8f399da3] + Libdl 
  [37e2e46d] + LinearAlgebra 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [44cfe95a] + Pkg 
  [de0858da] + Printf 
  [3fa0cd96] + REPL 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [cf7118a7] + UUIDs 
  [4ec0a83e] + Unicode 
  Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
  Building LightXML ─→ `~/.julia/packages/LightXML/W8FVT/deps/build.log`
   Testing Granular
    Status `/tmp/jl_mqjKTY/Manifest.toml`
  [b99e7846] BinaryProvider v0.5.8
  [944b1d66] CodecZlib v0.6.0
  [864edb3b] DataStructures v0.17.6
  [5789e2e9] FileIO v1.1.0
  [f5c4805d] Granular v0.4.3
  [033835bb] JLD2 v0.1.9
  [9c8b4983] LightXML v0.8.1
  [bac558e1] OrderedCollections v1.1.0
  [3bb67fe8] TranscodingStreams v0.9.5
  [64499a7a] WriteVTK v1.2.2
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8bb1440f] DelimitedFiles  [`@stdlib/DelimitedFiles`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [76f85450] LibGit2  [`@stdlib/LibGit2`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [37e2e46d] LinearAlgebra  [`@stdlib/LinearAlgebra`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [44cfe95a] Pkg  [`@stdlib/Pkg`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [3fa0cd96] REPL  [`@stdlib/REPL`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [cf7118a7] UUIDs  [`@stdlib/UUIDs`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
┌ Warning: Package NetCDF not found. Ocean/atmosphere grid read not supported. If required, install NetCDF and its requirements with `Pkg.add("NetCDF")`.
└ @ Granular ~/.julia/packages/Granular/5nDVL/src/ocean.jl:19
Info: #### compressive_failure.jl ####
[ Info: Testing compressive failure: uniaxial compression
[ Info: Testing compressive failure: shear
[ Info: Testing robustness of overlap calculations
Info: #### cohesion.jl ####
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: # Check contact age scheme
[ Info: # Check if bonds add tensile strength
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (one grain rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Add shear strength and test bending resistance (both grains rotating)
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending I
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
[ Info: # Break bond through bending II
[ Info: Added grain 1
[ Info: Added grain 2
[ Info: Time step length t=0.008478741928617433 s
Info: #### grain.jl ####
[ Info: Writing simple simulation to VTK file
  density:                 934.0 kg/m^3
  thickness:               1.0 m
  contact_radius:          10.0 m
  areal_radius:            10.0 m
  circumreference:         62.83185307179586 m
  horizontal_surface_area: 314.1592653589793 m^2
  side_surface_area:       62.83185307179586 m^2
  volume:                  314.1592653589793 m^3
  mass:                    293424.7538452867 kg
  moment_of_inertia:       1.4671237692264333e7 kg*m^2

  lin_pos: [0.0, 0.0, 0.0] m
  lin_vel: [0.0, 0.0, 0.0] m/s
  lin_acc: [0.0, 0.0, 0.0] m/s^2
  force:   [0.0, 0.0, 0.0] N

  external_body_force: [0.0, 0.0, 0.0] N

  ang_pos: [0.0, 0.0, 0.0] rad
  ang_vel: [0.0, 0.0, 0.0] rad/s
  ang_acc: [0.0, 0.0, 0.0] rad/s^2
  torque:  [0.0, 0.0, 0.0] N*m

  fixed:       false
  allow_x_acc: false
  allow_y_acc: false
  allow_z_acc: false
  rotating:    true
  enabled:     true

  k_n: 1.0e7 N/m
  k_t: 0.0 N/m
  γ_n: 0.0 N/(m/s)
  γ_t: 0.0 N/(m/s)
  μ_s: 0.4
  μ_d: 0.4

  E:                    2.0e7 Pa
  ν:                    0.185
  tensile_strength:     0.0 Pa
  shear_strength:       0.0 Pa
  strength_heal_rate:   Inf Pa/s
  fracture_toughness:   0.0 m^0.5 Pa

  c_o_v:  0.85
  c_o_h:  0.0005
  c_a_v:  0.4
  c_a_h:  0.00025

  pressure:   0.0 Pa
  n_contacts: 0
  contacts:   [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
  pos_ij:     Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  δ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  θ_t:        Array{Float64,1}[[0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0], [0.0, 0.0, 0.0]]

  granular_stress:   [0.0, 0.0, 0.0] Pa
  ocean_stress:      [0.0, 0.0, 0.0] Pa
  atmosphere_stress: [0.0, 0.0, 0.0] Pa

  thermal_energy:    0.0 J

  color:  0

[ Info: Testing grain value checks 
[ Info: Testing grain comparison 
┌ Warning: Skipping plotting routines: Could not launch gnuplot process
└ @ Main ~/.julia/packages/Granular/5nDVL/test/grain.jl:37
[ Info: Testing external body force routines
[ Info: Testing zeroKinematics!()
Info: #### vtk.jl ####
[ Info: Writing simple simulation to VTK file
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vtu' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
┌ Warning: detected extension '.1' does not correspond to dataset type.
│ Appending '.vts' to filename.
└ @ WriteVTK ~/.julia/packages/WriteVTK/05uqa/src/WriteVTK.jl:107
Test Failed at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
  Expression: read(#= /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42 =# Core.@cmd("\$(cmd) \$(grainpath)\$(cmd_post)"), String) == grainchecksum
   Evaluated: "b1748cb82e8270d951d9c1acaea0d151f0a5c48a1255e75de350bf9bcbc15fe9  test/test.grains.1.vtu\n" == "a698c24d46d15db97bb4d77d11ef1381d6cdf6536606d5c6482b063f47a20f68  test/test.grains.1.vtu\n"
ERROR: LoadError: LoadError: There was an error during testing
in expression starting at /root/.julia/packages/Granular/5nDVL/test/vtk.jl:42
in expression starting at /root/.julia/packages/Granular/5nDVL/test/runtests.jl:13
ERROR: Package Granular errored during testing
Stacktrace:
 [1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
 [2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
 [3] #test at ./none:0 [inlined]
 [4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
 [5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
 [6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
 [7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
 [8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
 [9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
 [10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
 [11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
 [12] top-level scope at none:10