If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 8 minutes, 4 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Missings ──────────────────── v0.4.3
Installed DataAPI ───────────────────── v1.1.0
Installed FileIO ────────────────────── v1.1.0
Installed TableTraits ───────────────── v1.0.0
Installed NearestNeighbors ──────────── v0.4.4
Installed CSV ───────────────────────── v0.5.18
Installed GigaSOM ───────────────────── v0.2.2
Installed DataFrames ────────────────── v0.19.4
Installed DistributedArrays ─────────── v0.6.4
Installed StatsBase ─────────────────── v0.32.0
Installed ArrayLayouts ──────────────── v0.1.5
Installed StatsFuns ─────────────────── v0.9.0
Installed PDMats ────────────────────── v0.9.10
Installed DataValueInterfaces ───────── v1.0.0
Installed BinaryProvider ────────────── v0.5.8
Installed URIParser ─────────────────── v0.4.0
Installed Reexport ──────────────────── v0.2.0
Installed PooledArrays ──────────────── v0.5.2
Installed InvertedIndices ───────────── v1.0.0
Installed Tables ────────────────────── v0.2.11
Installed Compat ────────────────────── v2.2.0
Installed Rmath ─────────────────────── v0.5.1
Installed OrderedCollections ────────── v1.1.0
Installed FilePathsBase ─────────────── v0.7.0
Installed DataStructures ────────────── v0.17.6
Installed WeakRefStrings ────────────── v0.6.1
Installed FillArrays ────────────────── v0.8.2
Installed Parsers ───────────────────── v0.3.10
Installed JSON ──────────────────────── v0.21.0
Installed XLSX ──────────────────────── v0.5.8
Installed FCSFiles ──────────────────── v0.1.1
Installed Distributions ─────────────── v0.21.9
Installed StaticArrays ──────────────── v0.12.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed ZipFile ───────────────────── v0.8.3
Installed CategoricalArrays ─────────── v0.7.3
Installed QuadGK ────────────────────── v2.1.1
Installed SortingAlgorithms ─────────── v0.3.1
Installed LazyArrays ────────────────── v0.14.10
Installed EzXML ─────────────────────── v0.9.5
Installed Primes ────────────────────── v0.4.0
Installed Distances ─────────────────── v0.8.2
Installed MacroTools ────────────────── v0.5.2
Installed Arpack ────────────────────── v0.3.1
Installed SpecialFunctions ──────────── v0.8.0
Installed BinDeps ───────────────────── v0.8.10
Updating `~/.julia/environments/v1.2/Project.toml`
[a03a9c34] + GigaSOM v0.2.2
Updating `~/.julia/environments/v1.2/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[aaf54ef3] + DistributedArrays v0.6.4
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[d76558cf] + FCSFiles v0.1.1
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[a03a9c34] + GigaSOM v0.2.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[27ebfcd6] + Primes v0.4.0
[1fd47b50] + QuadGK v2.1.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[ea10d353] + WeakRefStrings v0.6.1
[fdbf4ff8] + XLSX v0.5.8
[a5390f91] + ZipFile v0.8.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building ZipFile ─────────→ `~/.julia/packages/ZipFile/oD4uG/deps/build.log`
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Testing GigaSOM
Status `/tmp/jl_NXGlQu/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[34da2185] Compat v2.2.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[aaf54ef3] DistributedArrays v0.6.4
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[d76558cf] FCSFiles v0.1.1
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[a03a9c34] GigaSOM v0.2.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[27ebfcd6] Primes v0.4.0
[1fd47b50] QuadGK v2.1.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.5.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[30578b45] URIParser v0.4.0
[ea10d353] WeakRefStrings v0.6.1
[fdbf4ff8] XLSX v0.5.8
[a5390f91] ZipFile v0.8.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Archive: PBMC8_fcs_files.zip
inflating: PBMC8_30min_patient1_BCR-XL.fcs
inflating: PBMC8_30min_patient1_Reference.fcs
inflating: PBMC8_30min_patient2_BCR-XL.fcs
inflating: PBMC8_30min_patient2_Reference.fcs
inflating: PBMC8_30min_patient3_BCR-XL.fcs
inflating: PBMC8_30min_patient3_Reference.fcs
inflating: PBMC8_30min_patient4_BCR-XL.fcs
inflating: PBMC8_30min_patient4_Reference.fcs
inflating: PBMC8_30min_patient5_BCR-XL.fcs
inflating: PBMC8_30min_patient5_Reference.fcs
inflating: PBMC8_30min_patient6_BCR-XL.fcs
inflating: PBMC8_30min_patient6_Reference.fcs
inflating: PBMC8_30min_patient7_BCR-XL.fcs
inflating: PBMC8_30min_patient7_Reference.fcs
inflating: PBMC8_30min_patient8_BCR-XL.fcs
inflating: PBMC8_30min_patient8_Reference.fcs
[ Info: The radius has been determined automatically.
Radius: 7.0710678118654755
Batch: Test Failed at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
Expression: refBatchDfCodes == batchDfCodesTest
Evaluated: 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │ == 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │
Stacktrace:
[1] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[3] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:30
Radius: 6.0
Radius: 0.1
Test Summary: | Pass Fail Total
GigaSOM test suite | 44 1 45
Sort and reduce test | 3 3
Checksums | 1 1
Dimensions - batch | 4 4
Batch | 13 1 14
Dimensions - parallel | 4 4
Parallel | 14 14
Test Satellite Functions | 5 5
ERROR: LoadError: Some tests did not pass: 44 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/GigaSOM/IPIOH/test/runtests.jl:8
ERROR: Package GigaSOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 6 minutes, 50 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed URIParser ─────────────────── v0.4.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Arpack ────────────────────── v0.3.1
Installed XLSX ──────────────────────── v0.5.8
Installed DistributedArrays ─────────── v0.6.4
Installed DataStructures ────────────── v0.17.6
Installed LazyArrays ────────────────── v0.14.10
Installed GigaSOM ───────────────────── v0.2.2
Installed StatsFuns ─────────────────── v0.9.0
Installed Compat ────────────────────── v2.2.0
Installed QuadGK ────────────────────── v2.1.1
Installed StaticArrays ──────────────── v0.12.1
Installed CategoricalArrays ─────────── v0.7.3
Installed Primes ────────────────────── v0.4.0
Installed FileIO ────────────────────── v1.1.0
Installed BinaryProvider ────────────── v0.5.8
Installed ZipFile ───────────────────── v0.8.3
Installed Missings ──────────────────── v0.4.3
Installed InvertedIndices ───────────── v1.0.0
Installed Parsers ───────────────────── v0.3.10
Installed NearestNeighbors ──────────── v0.4.4
Installed Distributions ─────────────── v0.21.9
Installed CSV ───────────────────────── v0.5.18
Installed MacroTools ────────────────── v0.5.2
Installed TableTraits ───────────────── v1.0.0
Installed Rmath ─────────────────────── v0.5.1
Installed OrderedCollections ────────── v1.1.0
Installed SpecialFunctions ──────────── v0.8.0
Installed JSON ──────────────────────── v0.21.0
Installed BinDeps ───────────────────── v0.8.10
Installed Distances ─────────────────── v0.8.2
Installed ArrayLayouts ──────────────── v0.1.5
Installed EzXML ─────────────────────── v0.9.5
Installed DataAPI ───────────────────── v1.1.0
Installed FilePathsBase ─────────────── v0.7.0
Installed Tables ────────────────────── v0.2.11
Installed DataValueInterfaces ───────── v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed WeakRefStrings ────────────── v0.6.1
Installed DataFrames ────────────────── v0.19.4
Installed FillArrays ────────────────── v0.8.2
Installed Reexport ──────────────────── v0.2.0
Installed PDMats ────────────────────── v0.9.10
Installed FCSFiles ──────────────────── v0.1.1
Installed StatsBase ─────────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[a03a9c34] + GigaSOM v0.2.2
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[aaf54ef3] + DistributedArrays v0.6.4
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[d76558cf] + FCSFiles v0.1.1
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[a03a9c34] + GigaSOM v0.2.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[27ebfcd6] + Primes v0.4.0
[1fd47b50] + QuadGK v2.1.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[ea10d353] + WeakRefStrings v0.6.1
[fdbf4ff8] + XLSX v0.5.8
[a5390f91] + ZipFile v0.8.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building ZipFile ─────────→ `~/.julia/packages/ZipFile/oD4uG/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Testing GigaSOM
Status `/tmp/jl_fYNp7k/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[34da2185] Compat v2.2.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[aaf54ef3] DistributedArrays v0.6.4
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[d76558cf] FCSFiles v0.1.1
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[a03a9c34] GigaSOM v0.2.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[27ebfcd6] Primes v0.4.0
[1fd47b50] QuadGK v2.1.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.5.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[30578b45] URIParser v0.4.0
[ea10d353] WeakRefStrings v0.6.1
[fdbf4ff8] XLSX v0.5.8
[a5390f91] ZipFile v0.8.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Archive: PBMC8_fcs_files.zip
inflating: PBMC8_30min_patient1_BCR-XL.fcs
inflating: PBMC8_30min_patient1_Reference.fcs
inflating: PBMC8_30min_patient2_BCR-XL.fcs
inflating: PBMC8_30min_patient2_Reference.fcs
inflating: PBMC8_30min_patient3_BCR-XL.fcs
inflating: PBMC8_30min_patient3_Reference.fcs
inflating: PBMC8_30min_patient4_BCR-XL.fcs
inflating: PBMC8_30min_patient4_Reference.fcs
inflating: PBMC8_30min_patient5_BCR-XL.fcs
inflating: PBMC8_30min_patient5_Reference.fcs
inflating: PBMC8_30min_patient6_BCR-XL.fcs
inflating: PBMC8_30min_patient6_Reference.fcs
inflating: PBMC8_30min_patient7_BCR-XL.fcs
inflating: PBMC8_30min_patient7_Reference.fcs
inflating: PBMC8_30min_patient8_BCR-XL.fcs
inflating: PBMC8_30min_patient8_Reference.fcs
[ Info: The radius has been determined automatically.
Radius: 7.0710678118654755
Batch: Test Failed at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
Expression: refBatchDfCodes == batchDfCodesTest
Evaluated: 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │ == 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │
Stacktrace:
[1] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:30
Radius: 6.0
Radius: 0.1
Test Summary: | Pass Fail Total
GigaSOM test suite | 44 1 45
Sort and reduce test | 3 3
Checksums | 1 1
Dimensions - batch | 4 4
Batch | 13 1 14
Dimensions - parallel | 4 4
Parallel | 14 14
Test Satellite Functions | 5 5
ERROR: LoadError: Some tests did not pass: 44 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/GigaSOM/IPIOH/test/runtests.jl:8
ERROR: Package GigaSOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful : package has test failures.
Last evaluation was ago and took 7 minutes, 51 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed WeakRefStrings ────────────── v0.6.1
Installed ArrayLayouts ──────────────── v0.1.5
Installed Tables ────────────────────── v0.2.11
Installed Primes ────────────────────── v0.4.0
Installed QuadGK ────────────────────── v2.1.1
Installed DataStructures ────────────── v0.17.6
Installed SpecialFunctions ──────────── v0.8.0
Installed GigaSOM ───────────────────── v0.2.2
Installed LazyArrays ────────────────── v0.14.10
Installed Compat ────────────────────── v2.2.0
Installed StaticArrays ──────────────── v0.12.1
Installed DataFrames ────────────────── v0.19.4
Installed MacroTools ────────────────── v0.5.2
Installed BinDeps ───────────────────── v0.8.10
Installed Arpack ────────────────────── v0.3.1
Installed StatsBase ─────────────────── v0.32.0
Installed FillArrays ────────────────── v0.8.2
Installed URIParser ─────────────────── v0.4.0
Installed FileIO ────────────────────── v1.1.0
Installed Missings ──────────────────── v0.4.3
Installed PooledArrays ──────────────── v0.5.2
Installed TableTraits ───────────────── v1.0.0
Installed FilePathsBase ─────────────── v0.7.0
Installed StatsFuns ─────────────────── v0.9.0
Installed Rmath ─────────────────────── v0.5.1
Installed BinaryProvider ────────────── v0.5.8
Installed InvertedIndices ───────────── v1.0.0
Installed ZipFile ───────────────────── v0.8.3
Installed EzXML ─────────────────────── v0.9.5
Installed DistributedArrays ─────────── v0.6.4
Installed XLSX ──────────────────────── v0.5.8
Installed Distances ─────────────────── v0.8.2
Installed DataValueInterfaces ───────── v1.0.0
Installed Reexport ──────────────────── v0.2.0
Installed Distributions ─────────────── v0.21.9
Installed CategoricalArrays ─────────── v0.7.3
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed FCSFiles ──────────────────── v0.1.1
Installed DataAPI ───────────────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed PDMats ────────────────────── v0.9.10
Installed CSV ───────────────────────── v0.5.18
Installed NearestNeighbors ──────────── v0.4.4
Installed Parsers ───────────────────── v0.3.10
Installed SortingAlgorithms ─────────── v0.3.1
Installed OrderedCollections ────────── v1.1.0
Updating `~/.julia/environments/v1.3/Project.toml`
[a03a9c34] + GigaSOM v0.2.2
Updating `~/.julia/environments/v1.3/Manifest.toml`
[7d9fca2a] + Arpack v0.3.1
[4c555306] + ArrayLayouts v0.1.5
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[aaf54ef3] + DistributedArrays v0.6.4
[31c24e10] + Distributions v0.21.9
[8f5d6c58] + EzXML v0.9.5
[d76558cf] + FCSFiles v0.1.1
[5789e2e9] + FileIO v1.1.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[a03a9c34] + GigaSOM v0.2.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[27ebfcd6] + Primes v0.4.0
[1fd47b50] + QuadGK v2.1.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.5.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[30578b45] + URIParser v0.4.0
[ea10d353] + WeakRefStrings v0.6.1
[fdbf4ff8] + XLSX v0.5.8
[a5390f91] + ZipFile v0.8.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Arpack ──────────→ `~/.julia/packages/Arpack/cu5By/deps/build.log`
Building Rmath ───────────→ `~/.julia/packages/Rmath/4wt82/deps/build.log`
Building EzXML ───────────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Building ZipFile ─────────→ `~/.julia/packages/ZipFile/oD4uG/deps/build.log`
Testing GigaSOM
Status `/tmp/jl_uIsEZn/Manifest.toml`
[7d9fca2a] Arpack v0.3.1
[4c555306] ArrayLayouts v0.1.5
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[34da2185] Compat v2.2.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[aaf54ef3] DistributedArrays v0.6.4
[31c24e10] Distributions v0.21.9
[8f5d6c58] EzXML v0.9.5
[d76558cf] FCSFiles v0.1.1
[5789e2e9] FileIO v1.1.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[a03a9c34] GigaSOM v0.2.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.10
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[27ebfcd6] Primes v0.4.0
[1fd47b50] QuadGK v2.1.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.5.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[30578b45] URIParser v0.4.0
[ea10d353] WeakRefStrings v0.6.1
[fdbf4ff8] XLSX v0.5.8
[a5390f91] ZipFile v0.8.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[4607b0f0] SuiteSparse [`@stdlib/SuiteSparse`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
Archive: PBMC8_fcs_files.zip
inflating: PBMC8_30min_patient1_BCR-XL.fcs
inflating: PBMC8_30min_patient1_Reference.fcs
inflating: PBMC8_30min_patient2_BCR-XL.fcs
inflating: PBMC8_30min_patient2_Reference.fcs
inflating: PBMC8_30min_patient3_BCR-XL.fcs
inflating: PBMC8_30min_patient3_Reference.fcs
inflating: PBMC8_30min_patient4_BCR-XL.fcs
inflating: PBMC8_30min_patient4_Reference.fcs
inflating: PBMC8_30min_patient5_BCR-XL.fcs
inflating: PBMC8_30min_patient5_Reference.fcs
inflating: PBMC8_30min_patient6_BCR-XL.fcs
inflating: PBMC8_30min_patient6_Reference.fcs
inflating: PBMC8_30min_patient7_BCR-XL.fcs
inflating: PBMC8_30min_patient7_Reference.fcs
inflating: PBMC8_30min_patient8_BCR-XL.fcs
inflating: PBMC8_30min_patient8_Reference.fcs
[ Info: The radius has been determined automatically.
Radius: 7.0710678118654755
Batch: Test Failed at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
Expression: refBatchDfCodes == batchDfCodesTest
Evaluated: 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │ == 10×10 DataFrame. Omitted printing of 4 columns
│ Row │ CD3 │ CD45 │ CD4 │ CD20 │ CD33 │ CD123 │
│ │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │ Float64 │
├─────┼─────────┼─────────┼─────────┼──────────┼──────────┼───────────┤
│ 1 │ 2.17562 │ 5.06073 │ 1.52296 │ 0.411481 │ 0.123321 │ 0.0552946 │
│ 2 │ 2.15522 │ 5.105 │ 1.51267 │ 0.388815 │ 0.158346 │ 0.100901 │
│ 3 │ 2.10844 │ 5.14377 │ 1.53902 │ 0.381674 │ 0.209516 │ 0.175111 │
│ 4 │ 2.04786 │ 5.17307 │ 1.60862 │ 0.400285 │ 0.269093 │ 0.269429 │
│ 5 │ 2.00096 │ 5.19129 │ 1.71735 │ 0.448452 │ 0.321568 │ 0.359893 │
│ 6 │ 1.99631 │ 5.20022 │ 1.84891 │ 0.517993 │ 0.352834 │ 0.418327 │
│ 7 │ 2.04444 │ 5.20353 │ 1.98118 │ 0.59147 │ 0.36037 │ 0.430147 │
│ 8 │ 2.13286 │ 5.20444 │ 2.0951 │ 0.651107 │ 0.353311 │ 0.400351 │
│ 9 │ 2.23729 │ 5.20471 │ 2.18 │ 0.68602 │ 0.344025 │ 0.345042 │
│ 10 │ 2.33559 │ 5.20507 │ 2.23443 │ 0.694313 │ 0.340601 │ 0.280396 │
Stacktrace:
[1] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:55
[2] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[3] top-level scope at /root/.julia/packages/GigaSOM/IPIOH/test/batch.jl:30
Radius: 6.0
Radius: 0.1
Test Summary: | Pass Fail Total
GigaSOM test suite | 44 1 45
Sort and reduce test | 3 3
Checksums | 1 1
Dimensions - batch | 4 4
Batch | 13 1 14
Dimensions - parallel | 4 4
Parallel | 14 14
Test Satellite Functions | 5 5
ERROR: LoadError: Some tests did not pass: 44 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /root/.julia/packages/GigaSOM/IPIOH/test/runtests.jl:8
ERROR: Package GigaSOM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10