If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was successful .
Last evaluation was ago and took 9 minutes, 38 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed ArrayLayouts ──────────────── v0.1.5
Installed DataAPI ───────────────────── v1.1.0
Installed Missings ──────────────────── v0.4.3
Installed Tokenize ──────────────────── v0.5.7
Installed TableTraits ───────────────── v1.0.0
Installed StatsBase ─────────────────── v0.32.0
Installed CSV ───────────────────────── v0.5.18
Installed DataFrames ────────────────── v0.18.4
Installed Reexport ──────────────────── v0.2.0
Installed DataValueInterfaces ───────── v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed CSTParser ─────────────────── v1.1.0
Installed Compat ────────────────────── v3.0.0
Installed OrderedCollections ────────── v1.1.0
Installed FilePathsBase ─────────────── v0.7.0
Installed Tables ────────────────────── v0.2.11
Installed DataStructures ────────────── v0.17.6
Installed WeakRefStrings ────────────── v0.6.1
Installed Parsers ───────────────────── v0.3.10
Installed JSON ──────────────────────── v0.21.0
Installed FillArrays ────────────────── v0.8.2
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed StaticArrays ──────────────── v0.12.1
Installed CategoricalArrays ─────────── v0.7.3
Installed SortingAlgorithms ─────────── v0.3.1
Installed MacroTools ────────────────── v0.5.1
Installed LazyArrays ────────────────── v0.14.10
Updating `~/.julia/environments/v1.2/Project.toml`
[336ed68f] + CSV v0.5.18
Updating `~/.julia/environments/v1.2/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[00ebfdb7] + CSTParser v1.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v3.0.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.18.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.1
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[0796e94c] + Tokenize v0.5.7
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing CSV
Resolving package versions...
Installed CodecZlib ────────── v0.6.0
Installed TranscodingStreams ─ v0.9.5
Installed BinaryProvider ───── v0.5.8
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_aNd7xk/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[00ebfdb7] CSTParser v1.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[34da2185] Compat v3.0.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.18.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.1
[e1d29d7a] Missings v0.4.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[0796e94c] Tokenize v0.5.7
[3bb67fe8] TranscodingStreams v0.9.5
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: Compat.Statistics is deprecated, use Statistics instead.
likely near /root/.julia/packages/CategoricalArrays/U3LvJ/src/extras.jl:1
WARNING: Compat.Markdown is deprecated, use Markdown instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:4
WARNING: Compat.Random is deprecated, use Random instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:35
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: error parsing Int64 on row = 1, col = 1: "abc
", error=INVALID: SENTINEL | NEWLINE | EOF | INVALID_DELIMITER
┌ Warning: incompatible julia version for `threaded=true`: 1.2.0, requires >= v"1.3", setting `threaded=false`
└ @ CSV ~/.julia/packages/CSV/GCUID/src/CSV.jl:395
testing test_utf8_with_BOM.csv
testing test_utf8.csv
testing test_windows.csv
testing test_single_column.csv
testing test_empty_file.csv
testing test_empty_file_newlines.csv
testing test_simple_quoted.csv
testing test_quoted_delim_and_newline.csv
testing test_quoted_numbers.csv
testing test_crlf_line_endings.csv
testing test_newline_line_endings.csv
testing test_mac_line_endings.csv
testing test_no_header.csv
testing test_2_footer_rows.csv
testing test_footer_missing.csv
testing test_footer_missing.csv
testing test_dates.csv
testing test_excel_date_formats.csv
testing test_datetimes.csv
testing test_missing_value_NULL.csv
testing test_missing_value_NULL.csv
testing test_missing_value.csv
testing test_header_range.csv
testing test_header_int_list.csv
testing test_basic.csv
testing test_basic_pipe.csv
testing test_tab_null_empty.txt
testing test_tab_null_string.txt
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=5, maxsize=Inf, ptr=1, mark=-1)
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=0, maxsize=Inf, ptr=1, mark=-1)
testing dash_as_null.csv
testing plus_as_null.csv
testing comma_decimal.csv
testing double_quote_quotechar_and_escapechar.csv
testing census.txt
testing bools.csv
testing attenu.csv
testing test_null_only_column.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing baseball.csv
testing FL_insurance_sample.csv
testing FL_insurance_sample.csv
testing SacramentocrimeJanuary2006.csv
testing Sacramentorealestatetransactions.csv
testing SalesJan2009.csv
testing stocks.csv
testing TechCrunchcontinentalUSA.csv
testing Fielding.csv
testing latest (1).csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
testing issue_198.csv
testing issue_198_part2.csv
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing issue_207.csv
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
testing issue_120.csv
testing pandas_zeros.csv
testing transposed.csv
testing transposed_1row.csv
testing transposed_emtpy.csv
testing transposed_extra_newline.csv
testing transposed_noheader.csv
testing transposed_noheader.csv
testing test_utf8.csv
testing test_utf8.csv
testing test_multiple_missing.csv
testing test_openclosequotes.csv
testing test_truestrings.csv
testing test_truestrings.csv
testing test_string_delimiters.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing test_basic.csv
testing test_basic.csv
testing test_truestrings.csv
testing test_repeated_delimiters.csv
testing test_comments1.csv
testing test_comments_multiple.csv
testing test_comments_multichar.csv
testing test_not_enough_columns.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_not_enough_columns2.csv
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_correct_trailing_missings.csv
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing norwegian_data.csv
testing test_duplicate_columnnames.csv
testing test_bad_datetime.csv
testing test_types.csv
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
testing test_issue_326.wsv
testing test_missing_last_field.csv
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing test_delim.tsv
testing test_delim.wsv
testing test_comment_first_row.csv
testing test_comment_first_row.csv
testing test_repeated_delim_371.csv
testing test_file_issue_154.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=43, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=17, maxsize=Inf, ptr=1, mark=-1)
testing heat_flux.dat
testing log001_vehicle_status_flags_0.txt
testing fecal_samples.csv
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
computed typecodes are: Int8[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 756, re-allocating from 756 to 1023...
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 1023, re-allocating from 1023 to 1083...
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
time for initial parsing to tape: 0.012093782424926758
types after parsing: Type[String, PooledString, Int64, String, Int64, PooledString, Int64, Date, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Float64}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, String}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Int64}], pool = 0.1
testing time.csv
testing escaped_pooled.csv
testing error_comment.txt
testing test_508.csv
testing test_basic.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
CSV.Rows("<Base.GenericIOBuffer{Array{UInt8,1}}>"):
Size: 1
Tables.Schema:
:X Union{Missing, String}thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
Test Summary: | Pass Total
CSV | 1197 1197
Testing CSV tests passed
Results with Julia v1.3.0
Testing was successful .
Last evaluation was ago and took 9 minutes.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed SortingAlgorithms ─────────── v0.3.1
Installed Compat ────────────────────── v3.0.0
Installed Parsers ───────────────────── v0.3.10
Installed DataStructures ────────────── v0.17.6
Installed StaticArrays ──────────────── v0.12.1
Installed LazyArrays ────────────────── v0.14.10
Installed CategoricalArrays ─────────── v0.7.3
Installed CSV ───────────────────────── v0.5.18
Installed Missings ──────────────────── v0.4.3
Installed OrderedCollections ────────── v1.1.0
Installed JSON ──────────────────────── v0.21.0
Installed MacroTools ────────────────── v0.5.1
Installed DataAPI ───────────────────── v1.1.0
Installed TableTraits ───────────────── v1.0.0
Installed ArrayLayouts ──────────────── v0.1.5
Installed DataValueInterfaces ───────── v1.0.0
Installed Tables ────────────────────── v0.2.11
Installed FilePathsBase ─────────────── v0.7.0
Installed CSTParser ─────────────────── v1.1.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed PooledArrays ──────────────── v0.5.2
Installed Reexport ──────────────────── v0.2.0
Installed WeakRefStrings ────────────── v0.6.1
Installed FillArrays ────────────────── v0.8.2
Installed DataFrames ────────────────── v0.18.4
Installed Tokenize ──────────────────── v0.5.7
Installed StatsBase ─────────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[336ed68f] + CSV v0.5.18
Updating `~/.julia/environments/v1.3/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[00ebfdb7] + CSTParser v1.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v3.0.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.18.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.1
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[0796e94c] + Tokenize v0.5.7
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing CSV
Resolving package versions...
Installed CodecZlib ────────── v0.6.0
Installed TranscodingStreams ─ v0.9.5
Installed BinaryProvider ───── v0.5.8
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_xuS6OS/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[00ebfdb7] CSTParser v1.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[34da2185] Compat v3.0.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.18.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.1
[e1d29d7a] Missings v0.4.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[0796e94c] Tokenize v0.5.7
[3bb67fe8] TranscodingStreams v0.9.5
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: Compat.Statistics is deprecated, use Statistics instead.
likely near /root/.julia/packages/CategoricalArrays/U3LvJ/src/extras.jl:1
WARNING: Compat.Markdown is deprecated, use Markdown instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:4
WARNING: Compat.Random is deprecated, use Random instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:35
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: error parsing Int64 on row = 1, col = 1: "abc
", error=INVALID: SENTINEL | NEWLINE | EOF | INVALID_DELIMITER
testing test_utf8_with_BOM.csv
testing test_utf8.csv
testing test_windows.csv
testing test_single_column.csv
testing test_empty_file.csv
testing test_empty_file_newlines.csv
testing test_simple_quoted.csv
testing test_quoted_delim_and_newline.csv
testing test_quoted_numbers.csv
testing test_crlf_line_endings.csv
testing test_newline_line_endings.csv
testing test_mac_line_endings.csv
testing test_no_header.csv
testing test_2_footer_rows.csv
testing test_footer_missing.csv
testing test_footer_missing.csv
testing test_dates.csv
testing test_excel_date_formats.csv
testing test_datetimes.csv
testing test_missing_value_NULL.csv
testing test_missing_value_NULL.csv
testing test_missing_value.csv
testing test_header_range.csv
testing test_header_int_list.csv
testing test_basic.csv
testing test_basic_pipe.csv
testing test_tab_null_empty.txt
testing test_tab_null_string.txt
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=5, maxsize=Inf, ptr=1, mark=-1)
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=0, maxsize=Inf, ptr=1, mark=-1)
testing dash_as_null.csv
testing plus_as_null.csv
testing comma_decimal.csv
testing double_quote_quotechar_and_escapechar.csv
testing census.txt
testing bools.csv
testing attenu.csv
testing test_null_only_column.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing baseball.csv
testing FL_insurance_sample.csv
testing FL_insurance_sample.csv
testing SacramentocrimeJanuary2006.csv
testing Sacramentorealestatetransactions.csv
testing SalesJan2009.csv
testing stocks.csv
testing TechCrunchcontinentalUSA.csv
testing Fielding.csv
testing latest (1).csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
testing issue_198.csv
testing issue_198_part2.csv
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing issue_207.csv
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
testing issue_120.csv
testing pandas_zeros.csv
testing transposed.csv
testing transposed_1row.csv
testing transposed_emtpy.csv
testing transposed_extra_newline.csv
testing transposed_noheader.csv
testing transposed_noheader.csv
testing test_utf8.csv
testing test_utf8.csv
testing test_multiple_missing.csv
testing test_openclosequotes.csv
testing test_truestrings.csv
testing test_truestrings.csv
testing test_string_delimiters.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing test_basic.csv
testing test_basic.csv
testing test_truestrings.csv
testing test_repeated_delimiters.csv
testing test_comments1.csv
testing test_comments_multiple.csv
testing test_comments_multichar.csv
testing test_not_enough_columns.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_not_enough_columns2.csv
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_correct_trailing_missings.csv
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing norwegian_data.csv
testing test_duplicate_columnnames.csv
testing test_bad_datetime.csv
testing test_types.csv
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
testing test_issue_326.wsv
testing test_missing_last_field.csv
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing test_delim.tsv
testing test_delim.wsv
testing test_comment_first_row.csv
testing test_comment_first_row.csv
testing test_repeated_delim_371.csv
testing test_file_issue_154.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=43, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=17, maxsize=Inf, ptr=1, mark=-1)
testing heat_flux.dat
testing log001_vehicle_status_flags_0.txt
testing fecal_samples.csv
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
computed typecodes are: Int8[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 756, re-allocating from 756 to 1023...
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 1023, re-allocating from 1023 to 1083...
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
time for initial parsing to tape: 0.009623050689697266
types after parsing: Type[String, PooledString, Int64, String, Int64, PooledString, Int64, Date, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Float64}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, String}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Int64}], pool = 0.1
testing time.csv
testing escaped_pooled.csv
testing error_comment.txt
testing test_508.csv
testing test_basic.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
CSV.Rows("<Base.GenericIOBuffer{Array{UInt8,1}}>"):
Size: 1
Tables.Schema:
:X Union{Missing, String}thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
Test Summary: | Pass Total
CSV | 1197 1197
Testing CSV tests passed
Results with Julia v1.3.1-pre-7704df0a5a
Testing was successful .
Last evaluation was ago and took 8 minutes, 35 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed Tables ────────────────────── v0.2.11
Installed WeakRefStrings ────────────── v0.6.1
Installed ArrayLayouts ──────────────── v0.1.5
Installed Compat ────────────────────── v3.0.0
Installed DataStructures ────────────── v0.17.6
Installed LazyArrays ────────────────── v0.14.10
Installed DataFrames ────────────────── v0.18.4
Installed CSV ───────────────────────── v0.5.18
Installed MacroTools ────────────────── v0.5.1
Installed Missings ──────────────────── v0.4.3
Installed PooledArrays ──────────────── v0.5.2
Installed FillArrays ────────────────── v0.8.2
Installed StaticArrays ──────────────── v0.12.1
Installed StatsBase ─────────────────── v0.32.0
Installed TableTraits ───────────────── v1.0.0
Installed CSTParser ─────────────────── v1.1.0
Installed Tokenize ──────────────────── v0.5.7
Installed FilePathsBase ─────────────── v0.7.0
Installed Reexport ──────────────────── v0.2.0
Installed DataValueInterfaces ───────── v1.0.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed JSON ──────────────────────── v0.21.0
Installed CategoricalArrays ─────────── v0.7.3
Installed DataAPI ───────────────────── v1.1.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed OrderedCollections ────────── v1.1.0
Installed Parsers ───────────────────── v0.3.10
Updating `~/.julia/environments/v1.3/Project.toml`
[336ed68f] + CSV v0.5.18
Updating `~/.julia/environments/v1.3/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[00ebfdb7] + CSTParser v1.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[34da2185] + Compat v3.0.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.18.4
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.1
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[0796e94c] + Tokenize v0.5.7
[ea10d353] + WeakRefStrings v0.6.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing CSV
Resolving package versions...
Installed CodecZlib ────────── v0.6.0
Installed TranscodingStreams ─ v0.9.5
Installed BinaryProvider ───── v0.5.8
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Status `/tmp/jl_wSedZO/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[b99e7846] BinaryProvider v0.5.8
[00ebfdb7] CSTParser v1.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[944b1d66] CodecZlib v0.6.0
[34da2185] Compat v3.0.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.18.4
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.1
[e1d29d7a] Missings v0.4.3
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[0796e94c] Tokenize v0.5.7
[3bb67fe8] TranscodingStreams v0.9.5
[ea10d353] WeakRefStrings v0.6.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
WARNING: Compat.Statistics is deprecated, use Statistics instead.
likely near /root/.julia/packages/CategoricalArrays/U3LvJ/src/extras.jl:1
WARNING: Compat.Markdown is deprecated, use Markdown instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:4
WARNING: Compat.Random is deprecated, use Random instead.
likely near /root/.julia/packages/MacroTools/ys44U/src/MacroTools.jl:35
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: error parsing Int64 on row = 1, col = 1: "abc
", error=INVALID: SENTINEL | NEWLINE | EOF | INVALID_DELIMITER
testing test_utf8_with_BOM.csv
testing test_utf8.csv
testing test_windows.csv
testing test_single_column.csv
testing test_empty_file.csv
testing test_empty_file_newlines.csv
testing test_simple_quoted.csv
testing test_quoted_delim_and_newline.csv
testing test_quoted_numbers.csv
testing test_crlf_line_endings.csv
testing test_newline_line_endings.csv
testing test_mac_line_endings.csv
testing test_no_header.csv
testing test_2_footer_rows.csv
testing test_footer_missing.csv
testing test_footer_missing.csv
testing test_dates.csv
testing test_excel_date_formats.csv
testing test_datetimes.csv
testing test_missing_value_NULL.csv
testing test_missing_value_NULL.csv
testing test_missing_value.csv
testing test_header_range.csv
testing test_header_int_list.csv
testing test_basic.csv
testing test_basic_pipe.csv
testing test_tab_null_empty.txt
testing test_tab_null_string.txt
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=5, maxsize=Inf, ptr=1, mark=-1)
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=0, maxsize=Inf, ptr=1, mark=-1)
testing dash_as_null.csv
testing plus_as_null.csv
testing comma_decimal.csv
testing double_quote_quotechar_and_escapechar.csv
testing census.txt
testing bools.csv
testing attenu.csv
testing test_null_only_column.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing categorical.csv
testing baseball.csv
testing FL_insurance_sample.csv
testing FL_insurance_sample.csv
testing SacramentocrimeJanuary2006.csv
testing Sacramentorealestatetransactions.csv
testing SalesJan2009.csv
testing stocks.csv
testing TechCrunchcontinentalUSA.csv
testing Fielding.csv
testing latest (1).csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
testing issue_198.csv
testing issue_198_part2.csv
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing issue_207.csv
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 5 / 6 columns on data row: 2. Filling remaining columns with `missing`
testing issue_120.csv
testing pandas_zeros.csv
testing transposed.csv
testing transposed_1row.csv
testing transposed_emtpy.csv
testing transposed_extra_newline.csv
testing transposed_noheader.csv
testing transposed_noheader.csv
testing test_utf8.csv
testing test_utf8.csv
testing test_multiple_missing.csv
testing test_openclosequotes.csv
testing test_truestrings.csv
testing test_truestrings.csv
testing test_string_delimiters.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=20, maxsize=Inf, ptr=1, mark=-1)
testing test_basic.csv
testing test_basic.csv
testing test_truestrings.csv
testing test_repeated_delimiters.csv
testing test_comments1.csv
testing test_comments_multiple.csv
testing test_comments_multichar.csv
testing test_not_enough_columns.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_not_enough_columns2.csv
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing test_correct_trailing_missings.csv
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
testing norwegian_data.csv
testing test_duplicate_columnnames.csv
testing test_bad_datetime.csv
testing test_types.csv
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 7 / 8 columns on data row: 1. Filling remaining columns with `missing`
testing test_issue_326.wsv
testing test_missing_last_field.csv
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing test_delim.tsv
testing test_delim.wsv
testing test_comment_first_row.csv
testing test_comment_first_row.csv
testing test_repeated_delim_371.csv
testing test_file_issue_154.csv
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=16, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=19, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 1 / 3 columns on data row: 2. Filling remaining columns with `missing`
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=43, maxsize=Inf, ptr=1, mark=-1)
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 1. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
thread = 1 warning: parsed expected 5 columns, but didn't reach end of line on data row: 3. Ignoring any extra columns on this row
testing IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=17, maxsize=Inf, ptr=1, mark=-1)
testing heat_flux.dat
testing log001_vehicle_status_flags_0.txt
testing fecal_samples.csv
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
header is: 1, datarow computed as: 2
headerpos = 4, datapos = 481
estimated rows: 756
detected delimiter: ","
column names detected: Symbol[:SampleID, :Mother_Child, :SubjectID, :MaternalID, :TimePoint, :Fecal_EtOH, :CollectionRep, :DOC, :RAInitials_DOC, :DOF, :RAInitials_DOF, :Date_Brought_In, :RAInitials_Brought, :Date_Shipped, :RAInitials_Shipped, :Date_Aliquoted, :Number_Replicates, :RAInitials_Aliquot, :StorageBox, :DOE, :Extract_number, :AliquotRep, :DNABox, :KitUsed, :RAInitials_Extract, :DNAConc, :DOM, :Mgx_processed, :Mgx_batch, :DO16S, :_16S_processed, :_16S_batch, :_16S_plate, :Notes, :Discrepancies, :Batch_1_Mapping, :Mgx_batch_Mapping, :_16S_batch_Mapping, :Mother_Child_Dyads]
byte position of data computed at: 481
computed typecodes are: Int8[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 756, re-allocating from 756 to 1023...
thread = 1 warning: didn't pre-allocate enough tape while parsing on row 1023, re-allocating from 1023 to 1083...
thread = 1 warning: only found 38 / 39 columns on data row: 1079. Filling remaining columns with `missing`
time for initial parsing to tape: 0.01031804084777832
types after parsing: Type[String, PooledString, Int64, String, Int64, PooledString, Int64, Date, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Float64}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Date}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, String}, Union{Missing, PooledString}, Union{Missing, PooledString}, Union{Missing, Int64}], pool = 0.1
testing time.csv
testing escaped_pooled.csv
testing error_comment.txt
testing test_508.csv
testing test_basic.csv
thread = 1 warning: only found 3 / 5 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 3 / 5 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: only found 4 / 5 columns on data row: 2. Filling remaining columns with `missing`
CSV.Rows("<Base.GenericIOBuffer{Array{UInt8,1}}>"):
Size: 1
Tables.Schema:
:X Union{Missing, String}thread = 1 warning: only found 1 / 3 columns on data row: 1. Filling remaining columns with `missing`
thread = 1 warning: only found 2 / 3 columns on data row: 2. Filling remaining columns with `missing`
thread = 1 warning: parsed expected 3 columns, but didn't reach end of line on data row: 2. Ignoring any extra columns on this row
Test Summary: | Pass Total
CSV | 1197 1197
Testing CSV tests passed