If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl , making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 2 minutes, 49 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed DataAPI ───────────────────── v1.1.0
Installed Missings ──────────────────── v0.4.3
Installed NearestNeighbors ──────────── v0.4.4
Installed TableTraits ───────────────── v1.0.0
Installed BiobakeryUtils ────────────── v0.1.0
Installed StatsBase ─────────────────── v0.32.0
Installed DataFrames ────────────────── v0.19.4
Installed CSV ───────────────────────── v0.5.18
Installed Conda ─────────────────────── v1.3.0
Installed SpatialEcology ────────────── v0.7.0
Installed DataValueInterfaces ───────── v1.0.0
Installed EcoBase ───────────────────── v0.0.7
Installed ArrayLayouts ──────────────── v0.1.5
Installed PooledArrays ──────────────── v0.5.2
Installed WinReg ────────────────────── v0.3.1
Installed Requires ──────────────────── v0.5.2
Installed Reexport ──────────────────── v0.2.0
Installed InvertedIndices ───────────── v1.0.0
Installed OrderedCollections ────────── v1.1.0
Installed Tables ────────────────────── v0.2.11
Installed Compat ────────────────────── v2.2.0
Installed FilePathsBase ─────────────── v0.7.0
Installed RecipesBase ───────────────── v0.7.0
Installed DataStructures ────────────── v0.17.6
Installed WeakRefStrings ────────────── v0.6.1
Installed RandomNumbers ─────────────── v1.3.0
Installed Parsers ───────────────────── v0.3.10
Installed JSON ──────────────────────── v0.21.0
Installed ShiftedArrays ─────────────── v1.0.0
Installed FillArrays ────────────────── v0.8.2
Installed StatsModels ───────────────── v0.6.7
Installed Microbiome ────────────────── v0.4.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed DataFramesMeta ────────────── v0.5.0
Installed StaticArrays ──────────────── v0.12.1
Installed CategoricalArrays ─────────── v0.7.3
Installed RCall ─────────────────────── v0.13.4
Installed LazyArrays ────────────────── v0.14.10
Installed SortingAlgorithms ─────────── v0.3.1
Installed VersionParsing ────────────── v1.1.3
Installed Distances ─────────────────── v0.8.2
Installed Clustering ────────────────── v0.13.3
Installed MacroTools ────────────────── v0.5.2
Installed RandomBooleanMatrices ─────── v0.1.1
Updating `~/.julia/environments/v1.2/Project.toml`
[fa5322f5] + BiobakeryUtils v0.1.0
Updating `~/.julia/environments/v1.2/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[fa5322f5] + BiobakeryUtils v0.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[aaaa29a8] + Clustering v0.13.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[a58aae7d] + EcoBase v0.0.7
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[3bd8f0ae] + Microbiome v0.4.0
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[6f49c342] + RCall v0.13.4
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3eaba693] + StatsModels v0.6.7
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[1b915085] + WinReg v0.3.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda → `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building RCall → `~/.julia/packages/RCall/g7dhB/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1094
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:431
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/backwards_compatible_isolation.jl:647
Testing BiobakeryUtils
Resolving package versions...
Status `/tmp/jl_adKIku/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[fa5322f5] BiobakeryUtils v0.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[aaaa29a8] Clustering v0.13.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[a58aae7d] EcoBase v0.0.7
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[3bd8f0ae] Microbiome v0.4.0
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[6f49c342] RCall v0.13.4
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ERROR: LoadError: RCall not properly installed. Please run Pkg.build("RCall")
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] top-level scope at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:36
[3] include at ./boot.jl:328 [inlined]
[4] include_relative(::Module, ::String) at ./loading.jl:1094
[5] include(::Module, ::String) at ./Base.jl:31
[6] top-level scope at none:2
[7] eval at ./boot.jl:330 [inlined]
[8] eval(::Expr) at ./client.jl:432
[9] top-level scope at ./none:3
in expression starting at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:33
ERROR: LoadError: Failed to precompile RCall [6f49c342-dc21-5d91-9882-a32aef131414] to /root/.julia/compiled/v1.2/RCall/8GFyb.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1253
[3] _require(::Base.PkgId) at ./loading.jl:1013
[4] require(::Base.PkgId) at ./loading.jl:911
[5] require(::Module, ::Symbol) at ./loading.jl:906
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1094
[8] include(::Module, ::String) at ./Base.jl:31
[9] top-level scope at none:2
[10] eval at ./boot.jl:330 [inlined]
[11] eval(::Expr) at ./client.jl:432
[12] top-level scope at ./none:3
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/src/BiobakeryUtils.jl:20
ERROR: LoadError: Failed to precompile BiobakeryUtils [fa5322f5-bd84-5069-834a-abf3230fb8f8] to /root/.julia/compiled/v1.2/BiobakeryUtils/N1SNr.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1253
[3] _require(::Base.PkgId) at ./loading.jl:1013
[4] require(::Base.PkgId) at ./loading.jl:911
[5] require(::Module, ::Symbol) at ./loading.jl:906
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1094
[8] include(::Module, ::String) at ./Base.jl:31
[9] include(::String) at ./client.jl:431
[10] top-level scope at none:5
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/test/runtests.jl:1
ERROR: Package BiobakeryUtils errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 2 minutes, 47 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed SortingAlgorithms ─────────── v0.3.1
Installed Compat ────────────────────── v2.2.0
Installed BiobakeryUtils ────────────── v0.1.0
Installed DataStructures ────────────── v0.17.6
Installed StaticArrays ──────────────── v0.12.1
Installed LazyArrays ────────────────── v0.14.10
Installed CategoricalArrays ─────────── v0.7.3
Installed CSV ───────────────────────── v0.5.18
Installed Parsers ───────────────────── v0.3.10
Installed InvertedIndices ───────────── v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed WinReg ────────────────────── v0.3.1
Installed Missings ──────────────────── v0.4.3
Installed EcoBase ───────────────────── v0.0.7
Installed NearestNeighbors ──────────── v0.4.4
Installed MacroTools ────────────────── v0.5.2
Installed OrderedCollections ────────── v1.1.0
Installed ArrayLayouts ──────────────── v0.1.5
Installed RecipesBase ───────────────── v0.7.0
Installed JSON ──────────────────────── v0.21.0
Installed Distances ─────────────────── v0.8.2
Installed DataFramesMeta ────────────── v0.5.0
Installed DataAPI ───────────────────── v1.1.0
Installed RCall ─────────────────────── v0.13.4
Installed ShiftedArrays ─────────────── v1.0.0
Installed Tables ────────────────────── v0.2.11
Installed StatsModels ───────────────── v0.6.7
Installed VersionParsing ────────────── v1.1.3
Installed Requires ──────────────────── v0.5.2
Installed DataValueInterfaces ───────── v1.0.0
Installed Microbiome ────────────────── v0.4.0
Installed Conda ─────────────────────── v1.3.0
Installed RandomBooleanMatrices ─────── v0.1.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed FilePathsBase ─────────────── v0.7.0
Installed PooledArrays ──────────────── v0.5.2
Installed WeakRefStrings ────────────── v0.6.1
Installed FillArrays ────────────────── v0.8.2
Installed RandomNumbers ─────────────── v1.3.0
Installed SpatialEcology ────────────── v0.7.0
Installed DataFrames ────────────────── v0.19.4
Installed Reexport ──────────────────── v0.2.0
Installed Clustering ────────────────── v0.13.3
Installed StatsBase ─────────────────── v0.32.0
Updating `~/.julia/environments/v1.3/Project.toml`
[fa5322f5] + BiobakeryUtils v0.1.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[fa5322f5] + BiobakeryUtils v0.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[aaaa29a8] + Clustering v0.13.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[a58aae7d] + EcoBase v0.0.7
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[3bd8f0ae] + Microbiome v0.4.0
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[6f49c342] + RCall v0.13.4
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3eaba693] + StatsModels v0.6.7
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[1b915085] + WinReg v0.3.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda → `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building RCall → `~/.julia/packages/RCall/g7dhB/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1105
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:424
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/backwards_compatible_isolation.jl:649
Testing BiobakeryUtils
Resolving package versions...
Status `/tmp/jl_8oWyd7/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[fa5322f5] BiobakeryUtils v0.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[aaaa29a8] Clustering v0.13.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[a58aae7d] EcoBase v0.0.7
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[3bd8f0ae] Microbiome v0.4.0
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[6f49c342] RCall v0.13.4
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ERROR: LoadError: RCall not properly installed. Please run Pkg.build("RCall")
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] top-level scope at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:36
[3] include at ./boot.jl:328 [inlined]
[4] include_relative(::Module, ::String) at ./loading.jl:1105
[5] include(::Module, ::String) at ./Base.jl:31
[6] top-level scope at none:2
[7] eval at ./boot.jl:330 [inlined]
[8] eval(::Expr) at ./client.jl:425
[9] top-level scope at ./none:3
in expression starting at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:33
ERROR: LoadError: Failed to precompile RCall [6f49c342-dc21-5d91-9882-a32aef131414] to /root/.julia/compiled/v1.3/RCall/8GFyb_DKNET.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1283
[3] _require(::Base.PkgId) at ./loading.jl:1024
[4] require(::Base.PkgId) at ./loading.jl:922
[5] require(::Module, ::Symbol) at ./loading.jl:917
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1105
[8] include(::Module, ::String) at ./Base.jl:31
[9] top-level scope at none:2
[10] eval at ./boot.jl:330 [inlined]
[11] eval(::Expr) at ./client.jl:425
[12] top-level scope at ./none:3
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/src/BiobakeryUtils.jl:20
ERROR: LoadError: Failed to precompile BiobakeryUtils [fa5322f5-bd84-5069-834a-abf3230fb8f8] to /root/.julia/compiled/v1.3/BiobakeryUtils/N1SNr_DKNET.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1283
[3] _require(::Base.PkgId) at ./loading.jl:1024
[4] require(::Base.PkgId) at ./loading.jl:922
[5] require(::Module, ::Symbol) at ./loading.jl:917
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1105
[8] include(::Module, ::String) at ./Base.jl:31
[9] include(::String) at ./client.jl:424
[10] top-level scope at none:6
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/test/runtests.jl:1
ERROR: Package BiobakeryUtils errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful : testing failed for unknown reasons.
Last evaluation was ago and took 2 minutes, 59 seconds.
Click here to download the log file.
Click here to show the log contents.
Resolving package versions...
Installed WeakRefStrings ────────────── v0.6.1
Installed ArrayLayouts ──────────────── v0.1.5
Installed Tables ────────────────────── v0.2.11
Installed DataFramesMeta ────────────── v0.5.0
Installed Conda ─────────────────────── v1.3.0
Installed StatsModels ───────────────── v0.6.7
Installed BiobakeryUtils ────────────── v0.1.0
Installed DataStructures ────────────── v0.17.6
Installed Compat ────────────────────── v2.2.0
Installed StaticArrays ──────────────── v0.12.1
Installed MacroTools ────────────────── v0.5.2
Installed FillArrays ────────────────── v0.8.2
Installed DataFrames ────────────────── v0.19.4
Installed StatsBase ─────────────────── v0.32.0
Installed RCall ─────────────────────── v0.13.4
Installed RandomBooleanMatrices ─────── v0.1.1
Installed Missings ──────────────────── v0.4.3
Installed LazyArrays ────────────────── v0.14.10
Installed PooledArrays ──────────────── v0.5.2
Installed TableTraits ───────────────── v1.0.0
Installed ShiftedArrays ─────────────── v1.0.0
Installed FilePathsBase ─────────────── v0.7.0
Installed InvertedIndices ───────────── v1.0.0
Installed WinReg ────────────────────── v0.3.1
Installed Requires ──────────────────── v0.5.2
Installed DataValueInterfaces ───────── v1.0.0
Installed Distances ─────────────────── v0.8.2
Installed EcoBase ───────────────────── v0.0.7
Installed Reexport ──────────────────── v0.2.0
Installed SpatialEcology ────────────── v0.7.0
Installed CategoricalArrays ─────────── v0.7.3
Installed RecipesBase ───────────────── v0.7.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed DataAPI ───────────────────── v1.1.0
Installed Clustering ────────────────── v0.13.3
Installed Microbiome ────────────────── v0.4.0
Installed JSON ──────────────────────── v0.21.0
Installed RandomNumbers ─────────────── v1.3.0
Installed CSV ───────────────────────── v0.5.18
Installed OrderedCollections ────────── v1.1.0
Installed NearestNeighbors ──────────── v0.4.4
Installed VersionParsing ────────────── v1.1.3
Installed SortingAlgorithms ─────────── v0.3.1
Installed Parsers ───────────────────── v0.3.10
Updating `~/.julia/environments/v1.3/Project.toml`
[fa5322f5] + BiobakeryUtils v0.1.0
Updating `~/.julia/environments/v1.3/Manifest.toml`
[4c555306] + ArrayLayouts v0.1.5
[fa5322f5] + BiobakeryUtils v0.1.0
[336ed68f] + CSV v0.5.18
[324d7699] + CategoricalArrays v0.7.3
[aaaa29a8] + Clustering v0.13.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.19.4
[1313f7d8] + DataFramesMeta v0.5.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[a58aae7d] + EcoBase v0.0.7
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.14.10
[1914dd2f] + MacroTools v0.5.2
[3bd8f0ae] + Microbiome v0.4.0
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.2
[6f49c342] + RCall v0.13.4
[9ae346a0] + RandomBooleanMatrices v0.1.1
[e6cf234a] + RandomNumbers v1.3.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[348f2d5d] + SpatialEcology v0.7.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[3eaba693] + StatsModels v0.6.7
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[81def892] + VersionParsing v1.1.3
[ea10d353] + WeakRefStrings v0.6.1
[1b915085] + WinReg v0.3.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda → `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building RCall → `~/.julia/packages/RCall/g7dhB/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] top-level scope at /root/.julia/packages/RCall/g7dhB/deps/build.jl:44
│ [3] include at ./boot.jl:328 [inlined]
│ [4] include_relative(::Module, ::String) at ./loading.jl:1105
│ [5] include(::Module, ::String) at ./Base.jl:31
│ [6] include(::String) at ./client.jl:424
│ [7] top-level scope at none:5
│ in expression starting at /root/.julia/packages/RCall/g7dhB/deps/build.jl:10
└ @ Pkg.Operations /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/backwards_compatible_isolation.jl:649
Testing BiobakeryUtils
Resolving package versions...
Status `/tmp/jl_xFoPdK/Manifest.toml`
[4c555306] ArrayLayouts v0.1.5
[fa5322f5] BiobakeryUtils v0.1.0
[336ed68f] CSV v0.5.18
[324d7699] CategoricalArrays v0.7.3
[aaaa29a8] Clustering v0.13.3
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.19.4
[1313f7d8] DataFramesMeta v0.5.0
[864edb3b] DataStructures v0.17.6
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[a58aae7d] EcoBase v0.0.7
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.14.10
[1914dd2f] MacroTools v0.5.2
[3bd8f0ae] Microbiome v0.4.0
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[bac558e1] OrderedCollections v1.1.0
[69de0a69] Parsers v0.3.10
[2dfb63ee] PooledArrays v0.5.2
[6f49c342] RCall v0.13.4
[9ae346a0] RandomBooleanMatrices v0.1.1
[e6cf234a] RandomNumbers v1.3.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[348f2d5d] SpatialEcology v0.7.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[81def892] VersionParsing v1.1.3
[ea10d353] WeakRefStrings v0.6.1
[1b915085] WinReg v0.3.1
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[9fa8497b] Future [`@stdlib/Future`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
ERROR: LoadError: RCall not properly installed. Please run Pkg.build("RCall")
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] top-level scope at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:36
[3] include at ./boot.jl:328 [inlined]
[4] include_relative(::Module, ::String) at ./loading.jl:1105
[5] include(::Module, ::String) at ./Base.jl:31
[6] top-level scope at none:2
[7] eval at ./boot.jl:330 [inlined]
[8] eval(::Expr) at ./client.jl:425
[9] top-level scope at ./none:3
in expression starting at /root/.julia/packages/RCall/g7dhB/src/RCall.jl:33
ERROR: LoadError: Failed to precompile RCall [6f49c342-dc21-5d91-9882-a32aef131414] to /root/.julia/compiled/v1.3/RCall/8GFyb_312Re.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1283
[3] _require(::Base.PkgId) at ./loading.jl:1024
[4] require(::Base.PkgId) at ./loading.jl:922
[5] require(::Module, ::Symbol) at ./loading.jl:917
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1105
[8] include(::Module, ::String) at ./Base.jl:31
[9] top-level scope at none:2
[10] eval at ./boot.jl:330 [inlined]
[11] eval(::Expr) at ./client.jl:425
[12] top-level scope at ./none:3
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/src/BiobakeryUtils.jl:20
ERROR: LoadError: Failed to precompile BiobakeryUtils [fa5322f5-bd84-5069-834a-abf3230fb8f8] to /root/.julia/compiled/v1.3/BiobakeryUtils/N1SNr_312Re.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1283
[3] _require(::Base.PkgId) at ./loading.jl:1024
[4] require(::Base.PkgId) at ./loading.jl:922
[5] require(::Module, ::Symbol) at ./loading.jl:917
[6] include at ./boot.jl:328 [inlined]
[7] include_relative(::Module, ::String) at ./loading.jl:1105
[8] include(::Module, ::String) at ./Base.jl:31
[9] include(::String) at ./client.jl:424
[10] top-level scope at none:6
in expression starting at /root/.julia/packages/BiobakeryUtils/uvS9u/test/runtests.jl:1
ERROR: Package BiobakeryUtils errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10