BioServices

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If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl, making sure to read the FAQ first.

Results with Julia v1.2.0

Testing was successful. Last evaluation was ago and took 2 minutes, 39 seconds.

Click here to download the log file.

 Resolving package versions...
 Installed Parsers ──────────── v0.3.10
 Installed MbedTLS ──────────── v0.7.0
 Installed OrderedCollections ─ v1.1.0
 Installed BioServices ──────── v0.3.2
 Installed DataStructures ───── v0.17.6
 Installed EzXML ────────────── v0.9.5
 Installed BinaryProvider ───── v0.5.8
 Installed JSON ─────────────── v0.21.0
 Installed IniFile ──────────── v0.5.0
 Installed AbstractTrees ────── v0.2.1
 Installed Gumbo ────────────── v0.5.1
 Installed HTTP ─────────────── v0.8.8
 Installed XMLDict ──────────── v0.3.0
 Installed IterTools ────────── v1.3.0
  Updating `~/.julia/environments/v1.2/Project.toml`
  [a0d4ced5] + BioServices v0.3.2
  Updating `~/.julia/environments/v1.2/Manifest.toml`
  [1520ce14] + AbstractTrees v0.2.1
  [b99e7846] + BinaryProvider v0.5.8
  [a0d4ced5] + BioServices v0.3.2
  [864edb3b] + DataStructures v0.17.6
  [8f5d6c58] + EzXML v0.9.5
  [708ec375] + Gumbo v0.5.1
  [cd3eb016] + HTTP v0.8.8
  [83e8ac13] + IniFile v0.5.0
  [c8e1da08] + IterTools v1.3.0
  [682c06a0] + JSON v0.21.0
  [739be429] + MbedTLS v0.7.0
  [bac558e1] + OrderedCollections v1.1.0
  [69de0a69] + Parsers v0.3.10
  [228000da] + XMLDict v0.3.0
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [8f399da3] + Libdl 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [de0858da] + Printf 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [4ec0a83e] + Unicode 
  Building MbedTLS → `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
  Building EzXML ──→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
  Building Gumbo ──→ `~/.julia/packages/Gumbo/G7Qbw/deps/build.log`
   Testing BioServices
 Resolving package versions...
    Status `/tmp/jl_AcGYrH/Manifest.toml`
  [1520ce14] AbstractTrees v0.2.1
  [b99e7846] BinaryProvider v0.5.8
  [a0d4ced5] BioServices v0.3.2
  [864edb3b] DataStructures v0.17.6
  [8f5d6c58] EzXML v0.9.5
  [708ec375] Gumbo v0.5.1
  [cd3eb016] HTTP v0.8.8
  [83e8ac13] IniFile v0.5.0
  [c8e1da08] IterTools v1.3.0
  [682c06a0] JSON v0.21.0
  [739be429] MbedTLS v0.7.0
  [bac558e1] OrderedCollections v1.1.0
  [69de0a69] Parsers v0.3.10
  [228000da] XMLDict v0.3.0
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
Running tests:
-----------------------------------------
-----------------------------------------
       Testing: EUtils
-----------------------------------------
-----------------------------------------
Test Summary: | Pass  Total
EUtils        |   45     45
-----------------------------------------
-----------------------------------------
       Testing: UMLS
-----------------------------------------
-----------------------------------------
┌ Warning: UMLS tests could not run: Set up credentials as enviroment variables: UMLS_USER, UMLS_PSSWD and UMLS_APIKEY
└ @ Main.TestBioServices ~/.julia/packages/BioServices/KPZxN/test/umls.jl:13
Test Summary: |
UMLS          | No tests
-----------------------------------------
-----------------------------------------
   Testing: GGGenome
-----------------------------------------
-----------------------------------------
Test Summary: | Pass  Total
GGGenome      |    6      6
   Testing BioServices tests passed 

Results with Julia v1.3.0

Testing was successful. Last evaluation was ago and took 2 minutes, 30 seconds.

Click here to download the log file.

 Resolving package versions...
 Installed IniFile ──────────── v0.5.0
 Installed AbstractTrees ────── v0.2.1
 Installed MbedTLS ──────────── v0.7.0
 Installed IterTools ────────── v1.3.0
 Installed BioServices ──────── v0.3.2
 Installed EzXML ────────────── v0.9.5
 Installed DataStructures ───── v0.17.6
 Installed HTTP ─────────────── v0.8.8
 Installed BinaryProvider ───── v0.5.8
 Installed OrderedCollections ─ v1.1.0
 Installed JSON ─────────────── v0.21.0
 Installed Gumbo ────────────── v0.5.1
 Installed Parsers ──────────── v0.3.10
 Installed XMLDict ──────────── v0.3.0
  Updating `~/.julia/environments/v1.3/Project.toml`
  [a0d4ced5] + BioServices v0.3.2
  Updating `~/.julia/environments/v1.3/Manifest.toml`
  [1520ce14] + AbstractTrees v0.2.1
  [b99e7846] + BinaryProvider v0.5.8
  [a0d4ced5] + BioServices v0.3.2
  [864edb3b] + DataStructures v0.17.6
  [8f5d6c58] + EzXML v0.9.5
  [708ec375] + Gumbo v0.5.1
  [cd3eb016] + HTTP v0.8.8
  [83e8ac13] + IniFile v0.5.0
  [c8e1da08] + IterTools v1.3.0
  [682c06a0] + JSON v0.21.0
  [739be429] + MbedTLS v0.7.0
  [bac558e1] + OrderedCollections v1.1.0
  [69de0a69] + Parsers v0.3.10
  [228000da] + XMLDict v0.3.0
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [8f399da3] + Libdl 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [de0858da] + Printf 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [4ec0a83e] + Unicode 
  Building EzXML ──→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
  Building MbedTLS → `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
  Building Gumbo ──→ `~/.julia/packages/Gumbo/G7Qbw/deps/build.log`
   Testing BioServices
 Resolving package versions...
    Status `/tmp/jl_zrmZrn/Manifest.toml`
  [1520ce14] AbstractTrees v0.2.1
  [b99e7846] BinaryProvider v0.5.8
  [a0d4ced5] BioServices v0.3.2
  [864edb3b] DataStructures v0.17.6
  [8f5d6c58] EzXML v0.9.5
  [708ec375] Gumbo v0.5.1
  [cd3eb016] HTTP v0.8.8
  [83e8ac13] IniFile v0.5.0
  [c8e1da08] IterTools v1.3.0
  [682c06a0] JSON v0.21.0
  [739be429] MbedTLS v0.7.0
  [bac558e1] OrderedCollections v1.1.0
  [69de0a69] Parsers v0.3.10
  [228000da] XMLDict v0.3.0
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
Running tests:
-----------------------------------------
-----------------------------------------
       Testing: EUtils
-----------------------------------------
-----------------------------------------
Test Summary: | Pass  Total
EUtils        |   45     45
-----------------------------------------
-----------------------------------------
       Testing: UMLS
-----------------------------------------
-----------------------------------------
Test Summary: |
UMLS          | No tests
-----------------------------------------
-----------------------------------------
   Testing: GGGenome
-----------------------------------------
-----------------------------------------
┌ Warning: UMLS tests could not run: Set up credentials as enviroment variables: UMLS_USER, UMLS_PSSWD and UMLS_APIKEY
└ @ Main.TestBioServices ~/.julia/packages/BioServices/KPZxN/test/umls.jl:13
Test Summary: | Pass  Total
GGGenome      |    6      6
   Testing BioServices tests passed 

Results with Julia v1.3.1-pre-7704df0a5a

Testing was successful. Last evaluation was ago and took 3 minutes, 30 seconds.

Click here to download the log file.

 Resolving package versions...
 Installed XMLDict ──────────── v0.3.0
 Installed Gumbo ────────────── v0.5.1
 Installed BioServices ──────── v0.3.2
 Installed IterTools ────────── v1.3.0
 Installed DataStructures ───── v0.17.6
 Installed EzXML ────────────── v0.9.5
 Installed BinaryProvider ───── v0.5.8
 Installed JSON ─────────────── v0.21.0
 Installed HTTP ─────────────── v0.8.8
 Installed OrderedCollections ─ v1.1.0
 Installed AbstractTrees ────── v0.2.1
 Installed IniFile ──────────── v0.5.0
 Installed Parsers ──────────── v0.3.10
 Installed MbedTLS ──────────── v0.7.0
  Updating `~/.julia/environments/v1.3/Project.toml`
  [a0d4ced5] + BioServices v0.3.2
  Updating `~/.julia/environments/v1.3/Manifest.toml`
  [1520ce14] + AbstractTrees v0.2.1
  [b99e7846] + BinaryProvider v0.5.8
  [a0d4ced5] + BioServices v0.3.2
  [864edb3b] + DataStructures v0.17.6
  [8f5d6c58] + EzXML v0.9.5
  [708ec375] + Gumbo v0.5.1
  [cd3eb016] + HTTP v0.8.8
  [83e8ac13] + IniFile v0.5.0
  [c8e1da08] + IterTools v1.3.0
  [682c06a0] + JSON v0.21.0
  [739be429] + MbedTLS v0.7.0
  [bac558e1] + OrderedCollections v1.1.0
  [69de0a69] + Parsers v0.3.10
  [228000da] + XMLDict v0.3.0
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [8f399da3] + Libdl 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [de0858da] + Printf 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [6462fe0b] + Sockets 
  [8dfed614] + Test 
  [4ec0a83e] + Unicode 
  Building Gumbo ──→ `~/.julia/packages/Gumbo/G7Qbw/deps/build.log`
  Building EzXML ──→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
  Building MbedTLS → `~/.julia/packages/MbedTLS/a1JFn/deps/build.log`
   Testing BioServices
 Resolving package versions...
    Status `/tmp/jl_tqEp4L/Manifest.toml`
  [1520ce14] AbstractTrees v0.2.1
  [b99e7846] BinaryProvider v0.5.8
  [a0d4ced5] BioServices v0.3.2
  [864edb3b] DataStructures v0.17.6
  [8f5d6c58] EzXML v0.9.5
  [708ec375] Gumbo v0.5.1
  [cd3eb016] HTTP v0.8.8
  [83e8ac13] IniFile v0.5.0
  [c8e1da08] IterTools v1.3.0
  [682c06a0] JSON v0.21.0
  [739be429] MbedTLS v0.7.0
  [bac558e1] OrderedCollections v1.1.0
  [69de0a69] Parsers v0.3.10
  [228000da] XMLDict v0.3.0
  [2a0f44e3] Base64  [`@stdlib/Base64`]
  [ade2ca70] Dates  [`@stdlib/Dates`]
  [8ba89e20] Distributed  [`@stdlib/Distributed`]
  [b77e0a4c] InteractiveUtils  [`@stdlib/InteractiveUtils`]
  [8f399da3] Libdl  [`@stdlib/Libdl`]
  [56ddb016] Logging  [`@stdlib/Logging`]
  [d6f4376e] Markdown  [`@stdlib/Markdown`]
  [a63ad114] Mmap  [`@stdlib/Mmap`]
  [de0858da] Printf  [`@stdlib/Printf`]
  [9a3f8284] Random  [`@stdlib/Random`]
  [ea8e919c] SHA  [`@stdlib/SHA`]
  [9e88b42a] Serialization  [`@stdlib/Serialization`]
  [6462fe0b] Sockets  [`@stdlib/Sockets`]
  [8dfed614] Test  [`@stdlib/Test`]
  [4ec0a83e] Unicode  [`@stdlib/Unicode`]
Running tests:
-----------------------------------------
-----------------------------------------
       Testing: EUtils
-----------------------------------------
-----------------------------------------
Test Summary: | Pass  Total
EUtils        |   45     45
-----------------------------------------
-----------------------------------------
       Testing: UMLS
-----------------------------------------
-----------------------------------------
┌ Warning: UMLS tests could not run: Set up credentials as enviroment variables: UMLS_USER, UMLS_PSSWD and UMLS_APIKEY
└ @ Main.TestBioServices ~/.julia/packages/BioServices/KPZxN/test/umls.jl:13
Test Summary: |
UMLS          | No tests
-----------------------------------------
-----------------------------------------
   Testing: GGGenome
-----------------------------------------
-----------------------------------------
Test Summary: | Pass  Total
GGGenome      |    6      6
   Testing BioServices tests passed