If you think that there is an error in how your package is being tested or represented, please file an issue at NewPkgEval.jl, making sure to read the FAQ first.
Results with Julia v1.2.0
Testing was unsuccessful: package has test failures.
Last evaluation was ago and took 13 minutes, 5 seconds.
Resolving package versions...
Installed DataAPI ──────────────── v1.1.0
Installed Missings ─────────────── v0.4.3
Installed AbstractFFTs ─────────── v0.5.0
Installed LineSearches ─────────── v7.0.1
Installed Colors ───────────────── v0.9.6
Installed BinaryProvider ───────── v0.5.8
Installed StatsBase ────────────── v0.32.0
Installed ADCME ────────────────── v0.3.4
Installed CommonSubexpressions ─── v0.2.0
Installed HDF5 ─────────────────── v0.12.5
Installed Conda ────────────────── v1.3.0
Installed NLSolversBase ────────── v7.5.0
Installed Libz ─────────────────── v1.0.0
Installed Blosc ────────────────── v0.5.1
Installed Requires ─────────────── v0.5.2
Installed URIParser ────────────── v0.4.0
Installed Reexport ─────────────── v0.2.0
Installed Compat ───────────────── v2.2.0
Installed PyCall ───────────────── v1.91.2
Installed Calculus ─────────────── v0.5.1
Installed OrderedCollections ───── v1.1.0
Installed Suppressor ───────────── v0.1.1
Installed ForwardDiff ──────────── v0.10.7
Installed DataStructures ───────── v0.17.6
Installed MAT ──────────────────── v0.5.1
Installed FillArrays ───────────── v0.8.2
Installed FixedPointNumbers ────── v0.6.1
Installed Parsers ──────────────── v0.3.10
Installed ArrayInterface ───────── v2.0.0
Installed DiffRules ────────────── v0.1.0
Installed JSON ─────────────────── v0.21.0
Installed LaTeXStrings ─────────── v1.0.3
Installed NaNMath ──────────────── v0.3.3
Installed DiffEqDiffTools ──────── v1.5.0
Installed DiffResults ──────────── v0.0.4
Installed StaticArrays ─────────── v0.12.1
Installed Parameters ───────────── v0.12.0
Installed FFTW ─────────────────── v1.1.0
Installed PyPlot ───────────────── v2.8.2
Installed CMake ────────────────── v1.1.2
Installed SortingAlgorithms ────── v0.3.1
Installed BufferedStreams ──────── v1.0.0
Installed VersionParsing ───────── v1.1.3
Installed CMakeWrapper ─────────── v0.2.3
Installed ColorTypes ───────────── v0.8.0
Installed MacroTools ───────────── v0.5.2
Installed PositiveFactorizations ─ v0.2.3
Installed SpecialFunctions ─────── v0.8.0
Installed Optim ────────────────── v0.19.5
Installed BinDeps ──────────────── v0.8.10
Updating `~/.julia/environments/v1.2/Project.toml`
[07b341a0] + ADCME v0.3.4
Updating `~/.julia/environments/v1.2/Manifest.toml`
[07b341a0] + ADCME v0.3.4
[621f4979] + AbstractFFTs v0.5.0
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[a74b3585] + Blosc v0.5.1
[e1450e63] + BufferedStreams v1.0.0
[631607c0] + CMake v1.1.2
[d5fb7624] + CMakeWrapper v0.2.3
[49dc2e85] + Calculus v0.5.1
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[7a1cc6ca] + FFTW v1.1.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[f67ccb44] + HDF5 v0.12.5
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[2ec943e9] + Libz v1.0.0
[d3d80556] + LineSearches v7.0.1
[23992714] + MAT v0.5.1
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.8.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[fd094767] + Suppressor v0.1.1
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/ne2iw/deps/build.log`
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall ──────────→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building CMake ───────────→ `~/.julia/packages/CMake/nSK2r/deps/build.log`
Building Blosc ───────────→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
Building HDF5 ────────────→ `~/.julia/packages/HDF5/Zh9on/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building ADCME ───────────→ `~/.julia/packages/ADCME/PahXg/deps/build.log`
Testing ADCME
Resolving package versions...
Installed NLopt ──────── v0.5.1
Installed MathProgBase ─ v0.7.7
Building NLopt → `~/.julia/packages/NLopt/eqN9a/deps/build.log`
Status `/tmp/jl_RDBpYQ/Manifest.toml`
[07b341a0] ADCME v0.3.4
[621f4979] AbstractFFTs v0.5.0
[4fba245c] ArrayInterface v2.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[a74b3585] Blosc v0.5.1
[e1450e63] BufferedStreams v1.0.0
[631607c0] CMake v1.1.2
[d5fb7624] CMakeWrapper v0.2.3
[49dc2e85] Calculus v0.5.1
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[7a1cc6ca] FFTW v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[f67ccb44] HDF5 v0.12.5
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[2ec943e9] Libz v1.0.0
[d3d80556] LineSearches v7.0.1
[23992714] MAT v0.5.1
[1914dd2f] MacroTools v0.5.2
[fdba3010] MathProgBase v0.7.7
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[76087f3c] NLopt v0.5.1
[77ba4419] NaNMath v0.3.3
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[fd094767] Suppressor v0.1.1
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
┌ Warning: special characters "#{}()[]<>|&*?~;" should now be quoted in commands
│ caller = #shell_parse#353(::String, ::typeof(Base.shell_parse), ::String, ::Bool) at shell.jl:100
└ @ Base ./shell.jl:100
WARNING: Method definition size(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:806 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:130.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition length(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:805 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:153.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition lastindex(PyCall.PyObject) in module PyCall at deprecated.jl:65 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:313.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition *(PyCall.PyObject, PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/pyoperators.jl:11 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/ops.jl:66.
** incremental compilation may be fatally broken for this module **
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = (::getfield(ADCME, Symbol("##95#96")){PyObject})(::Int64) at none:0
└ @ ADCME ./none:0
2019-12-02 19:40:55.013388: W tensorflow/compiler/jit/mark_for_compilation_pass.cc:1412] (One-time warning): Not using XLA:CPU for cluster because envvar TF_XLA_FLAGS=--tf_xla_cpu_global_jit was not set. If you want XLA:CPU, either set that envvar, or use experimental_jit_scope to enable XLA:CPU. To confirm that XLA is active, pass --vmodule=xla_compilation_cache=1 (as a proper command-line flag, not via TF_XLA_FLAGS) or set the envvar XLA_FLAGS=--xla_hlo_profile.
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor, ::Int64) at sparse.jl:119
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:119
Test Summary: | Pass Total
sparse_constructor | 7 7
Test Summary: | Pass Total
sparse_arithmetic | 4 4
Test Summary: | Pass Total
sparse_adjoint | 1 1
Test Summary: | Pass Total
sparse_mul | 6 6
Test Summary: | Pass Total
sparse_vcat_hcat | 2 2
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
Test threw exception
Expression: run(sess, B[2:3, 2:3]) ≈ B1[2:3, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:813 [inlined]
[2] #run#536(::Bool, ::typeof(run), ::Cmd) at ./process.jl:728
[3] run at ./process.jl:726 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
Test threw exception
Expression: run(sess, B[2:3, :]) ≈ B1[2:3, :]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:813 [inlined]
[2] #run#536(::Bool, ::typeof(run), ::Cmd) at ./process.jl:728
[3] run at ./process.jl:726 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
Test threw exception
Expression: run(sess, B[:, 2:3]) ≈ B1[:, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:813 [inlined]
[2] #run#536(::Bool, ::typeof(run), ::Cmd) at ./process.jl:728
[3] run at ./process.jl:726 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Test/src/Test.jl:1113
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
Test Summary: | Error Total
sparse_indexing | 3 3
ERROR: LoadError: LoadError: Some tests did not pass: 0 passed, 0 failed, 3 errored, 0 broken.
in expression starting at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:63
in expression starting at /root/.julia/packages/ADCME/PahXg/test/runtests.jl:12
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:516: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:517: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:518: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:519: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:520: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:525: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:541: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:542: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:543: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:544: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:545: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:550: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
ERROR: Package ADCME errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Types.jl:112
[2] #test#119(::Bool, ::Nothing, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/Operations.jl:1288
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:245
[5] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:233 [inlined]
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:230 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:229 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.2/Pkg/src/API.jl:228
[12] top-level scope at none:10
Results with Julia v1.3.0
Testing was unsuccessful: package has test failures.
Last evaluation was ago and took 13 minutes, 10 seconds.
Resolving package versions...
Installed URIParser ────────────── v0.4.0
Installed SortingAlgorithms ────── v0.3.1
Installed Suppressor ───────────── v0.1.1
Installed DiffResults ──────────── v0.0.4
Installed DataStructures ───────── v0.17.6
Installed StaticArrays ─────────── v0.12.1
Installed LineSearches ─────────── v7.0.1
Installed ADCME ────────────────── v0.3.4
Installed FFTW ─────────────────── v1.1.0
Installed Compat ───────────────── v2.2.0
Installed BinaryProvider ───────── v0.5.8
Installed Parsers ──────────────── v0.3.10
Installed Missings ─────────────── v0.4.3
Installed MacroTools ───────────── v0.5.2
Installed NLSolversBase ────────── v7.5.0
Installed Libz ─────────────────── v1.0.0
Installed CMakeWrapper ─────────── v0.2.3
Installed PositiveFactorizations ─ v0.2.3
Installed OrderedCollections ───── v1.1.0
Installed SpecialFunctions ─────── v0.9.0
Installed JSON ─────────────────── v0.21.0
Installed PyCall ───────────────── v1.91.2
Installed Parameters ───────────── v0.12.0
Installed FixedPointNumbers ────── v0.6.1
Installed CommonSubexpressions ─── v0.2.0
Installed BinDeps ──────────────── v0.8.10
Installed DataAPI ──────────────── v1.1.0
Installed MAT ──────────────────── v0.5.1
Installed NaNMath ──────────────── v0.3.3
Installed ForwardDiff ──────────── v0.10.7
Installed ColorTypes ───────────── v0.8.0
Installed PyPlot ───────────────── v2.8.2
Installed Optim ────────────────── v0.19.5
Installed CMake ────────────────── v1.1.2
Installed OpenSpecFun_jll ──────── v0.5.3+1
Installed DiffRules ────────────── v0.1.0
Installed DiffEqDiffTools ──────── v1.5.0
Installed LaTeXStrings ─────────── v1.0.3
Installed Calculus ─────────────── v0.5.1
Installed ArrayInterface ───────── v2.0.0
Installed Colors ───────────────── v0.9.6
Installed Requires ─────────────── v0.5.2
Installed Conda ────────────────── v1.3.0
Installed VersionParsing ───────── v1.1.3
Installed Blosc ────────────────── v0.5.1
Installed StatsBase ────────────── v0.32.0
Installed HDF5 ─────────────────── v0.12.5
Installed Reexport ─────────────── v0.2.0
Installed AbstractFFTs ─────────── v0.5.0
Installed BufferedStreams ──────── v1.0.0
Installed FillArrays ───────────── v0.8.2
Updating `~/.julia/environments/v1.3/Project.toml`
[07b341a0] + ADCME v0.3.4
Updating `~/.julia/environments/v1.3/Manifest.toml`
[07b341a0] + ADCME v0.3.4
[621f4979] + AbstractFFTs v0.5.0
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[a74b3585] + Blosc v0.5.1
[e1450e63] + BufferedStreams v1.0.0
[631607c0] + CMake v1.1.2
[d5fb7624] + CMakeWrapper v0.2.3
[49dc2e85] + Calculus v0.5.1
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[7a1cc6ca] + FFTW v1.1.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[f67ccb44] + HDF5 v0.12.5
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[2ec943e9] + Libz v1.0.0
[d3d80556] + LineSearches v7.0.1
[23992714] + MAT v0.5.1
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[fd094767] + Suppressor v0.1.1
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ─→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall → `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building CMake ─→ `~/.julia/packages/CMake/nSK2r/deps/build.log`
Building Blosc ─→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
Building HDF5 ──→ `~/.julia/packages/HDF5/Zh9on/deps/build.log`
Building FFTW ──→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building ADCME ─→ `~/.julia/packages/ADCME/PahXg/deps/build.log`
Testing ADCME
Resolving package versions...
Installed MathProgBase ─ v0.7.7
Installed NLopt ──────── v0.5.1
Building NLopt → `~/.julia/packages/NLopt/eqN9a/deps/build.log`
Status `/tmp/jl_5ibglF/Manifest.toml`
[07b341a0] ADCME v0.3.4
[621f4979] AbstractFFTs v0.5.0
[4fba245c] ArrayInterface v2.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[a74b3585] Blosc v0.5.1
[e1450e63] BufferedStreams v1.0.0
[631607c0] CMake v1.1.2
[d5fb7624] CMakeWrapper v0.2.3
[49dc2e85] Calculus v0.5.1
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[7a1cc6ca] FFTW v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[f67ccb44] HDF5 v0.12.5
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[2ec943e9] Libz v1.0.0
[d3d80556] LineSearches v7.0.1
[23992714] MAT v0.5.1
[1914dd2f] MacroTools v0.5.2
[fdba3010] MathProgBase v0.7.7
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[76087f3c] NLopt v0.5.1
[77ba4419] NaNMath v0.3.3
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.9.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[fd094767] Suppressor v0.1.1
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
┌ Warning: Parsing command "tensorboard --logdir="$(sw.tdir)" --port $port &". Special characters "#{}()[]<>|&*?~;" should now be quoted in commands
│ caller = #shell_parse#350(::String, ::typeof(Base.shell_parse), ::String, ::Bool) at shell.jl:107
└ @ Base ./shell.jl:107
WARNING: Method definition size(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:806 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:130.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition length(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:805 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:153.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition lastindex(PyCall.PyObject) in module PyCall at deprecated.jl:65 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:313.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition *(PyCall.PyObject, PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/pyoperators.jl:11 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/ops.jl:66.
** incremental compilation may be fatally broken for this module **
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = (::ADCME.var"#95#96"{PyObject})(::Int64) at none:0
└ @ ADCME ./none:0
2019-12-02 22:43:56.030195: W tensorflow/compiler/jit/mark_for_compilation_pass.cc:1412] (One-time warning): Not using XLA:CPU for cluster because envvar TF_XLA_FLAGS=--tf_xla_cpu_global_jit was not set. If you want XLA:CPU, either set that envvar, or use experimental_jit_scope to enable XLA:CPU. To confirm that XLA is active, pass --vmodule=xla_compilation_cache=1 (as a proper command-line flag, not via TF_XLA_FLAGS) or set the envvar XLA_FLAGS=--xla_hlo_profile.
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor, ::Int64) at sparse.jl:119
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:119
Test Summary: | Pass Total
sparse_constructor | 7 7
Test Summary: | Pass Total
sparse_arithmetic | 4 4
Test Summary: | Pass Total
sparse_adjoint | 1 1
Test Summary: | Pass Total
sparse_mul | 6 6
Test Summary: | Pass Total
sparse_vcat_hcat | 2 2
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
Test threw exception
Expression: run(sess, B[2:3, 2:3]) ≈ B1[2:3, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
Test threw exception
Expression: run(sess, B[2:3, :]) ≈ B1[2:3, :]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
Test threw exception
Expression: run(sess, B[:, 2:3]) ≈ B1[:, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[7] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[9] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
Test Summary: | Error Total
sparse_indexing | 3 3
ERROR: LoadError: LoadError: Some tests did not pass: 0 passed, 0 failed, 3 errored, 0 broken.
in expression starting at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:63
in expression starting at /root/.julia/packages/ADCME/PahXg/test/runtests.jl:12
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:516: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:517: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:518: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:519: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:520: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:525: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:541: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:542: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:543: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:544: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:545: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:550: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
ERROR: Package ADCME errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10
Results with Julia v1.3.1-pre-7704df0a5a
Testing was unsuccessful: package has test failures.
Last evaluation was ago and took 12 minutes, 53 seconds.
Resolving package versions...
Installed ColorTypes ───────────── v0.8.0
Installed Conda ────────────────── v1.3.0
Installed HDF5 ─────────────────── v0.12.5
Installed PyCall ───────────────── v1.91.2
Installed DataStructures ───────── v0.17.6
Installed Colors ───────────────── v0.9.6
Installed Optim ────────────────── v0.19.5
Installed ADCME ────────────────── v0.3.4
Installed CMake ────────────────── v1.1.2
Installed NaNMath ──────────────── v0.3.3
Installed Compat ───────────────── v2.2.0
Installed DiffResults ──────────── v0.0.4
Installed SpecialFunctions ─────── v0.9.0
Installed BinDeps ──────────────── v0.8.10
Installed StaticArrays ─────────── v0.12.1
Installed OpenSpecFun_jll ──────── v0.5.3+1
Installed FixedPointNumbers ────── v0.6.1
Installed MacroTools ───────────── v0.5.2
Installed StatsBase ────────────── v0.32.0
Installed LaTeXStrings ─────────── v1.0.3
Installed FillArrays ───────────── v0.8.2
Installed Calculus ─────────────── v0.5.1
Installed ForwardDiff ──────────── v0.10.7
Installed Blosc ────────────────── v0.5.1
Installed BufferedStreams ──────── v1.0.0
Installed CMakeWrapper ─────────── v0.2.3
Installed LineSearches ─────────── v7.0.1
Installed URIParser ────────────── v0.4.0
Installed FFTW ─────────────────── v1.1.0
Installed Libz ─────────────────── v1.0.0
Installed Missings ─────────────── v0.4.3
Installed CommonSubexpressions ─── v0.2.0
Installed Parameters ───────────── v0.12.0
Installed BinaryProvider ───────── v0.5.8
Installed NLSolversBase ────────── v7.5.0
Installed DiffRules ────────────── v0.1.0
Installed Requires ─────────────── v0.5.2
Installed PyPlot ───────────────── v2.8.2
Installed ArrayInterface ───────── v2.0.0
Installed Reexport ─────────────── v0.2.0
Installed Suppressor ───────────── v0.1.1
Installed MAT ──────────────────── v0.5.1
Installed PositiveFactorizations ─ v0.2.3
Installed DataAPI ──────────────── v1.1.0
Installed AbstractFFTs ─────────── v0.5.0
Installed JSON ─────────────────── v0.21.0
Installed OrderedCollections ───── v1.1.0
Installed Parsers ──────────────── v0.3.10
Installed DiffEqDiffTools ──────── v1.5.0
Installed VersionParsing ───────── v1.1.3
Installed SortingAlgorithms ────── v0.3.1
Updating `~/.julia/environments/v1.3/Project.toml`
[07b341a0] + ADCME v0.3.4
Updating `~/.julia/environments/v1.3/Manifest.toml`
[07b341a0] + ADCME v0.3.4
[621f4979] + AbstractFFTs v0.5.0
[4fba245c] + ArrayInterface v2.0.0
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[a74b3585] + Blosc v0.5.1
[e1450e63] + BufferedStreams v1.0.0
[631607c0] + CMake v1.1.2
[d5fb7624] + CMakeWrapper v0.2.3
[49dc2e85] + Calculus v0.5.1
[3da002f7] + ColorTypes v0.8.0
[5ae59095] + Colors v0.9.6
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[01453d9d] + DiffEqDiffTools v1.5.0
[163ba53b] + DiffResults v0.0.4
[b552c78f] + DiffRules v0.1.0
[7a1cc6ca] + FFTW v1.1.0
[1a297f60] + FillArrays v0.8.2
[53c48c17] + FixedPointNumbers v0.6.1
[f6369f11] + ForwardDiff v0.10.7
[f67ccb44] + HDF5 v0.12.5
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.0.3
[2ec943e9] + Libz v1.0.0
[d3d80556] + LineSearches v7.0.1
[23992714] + MAT v0.5.1
[1914dd2f] + MacroTools v0.5.2
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.5.0
[77ba4419] + NaNMath v0.3.3
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[429524aa] + Optim v0.19.5
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[85a6dd25] + PositiveFactorizations v0.2.3
[438e738f] + PyCall v1.91.2
[d330b81b] + PyPlot v2.8.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[fd094767] + Suppressor v0.1.1
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.1.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ─→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building PyCall → `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Building CMake ─→ `~/.julia/packages/CMake/nSK2r/deps/build.log`
Building Blosc ─→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
Building HDF5 ──→ `~/.julia/packages/HDF5/Zh9on/deps/build.log`
Building FFTW ──→ `~/.julia/packages/FFTW/loJ3F/deps/build.log`
Building ADCME ─→ `~/.julia/packages/ADCME/PahXg/deps/build.log`
Testing ADCME
Resolving package versions...
Installed MathProgBase ─ v0.7.7
Installed NLopt ──────── v0.5.1
Building NLopt → `~/.julia/packages/NLopt/eqN9a/deps/build.log`
Status `/tmp/jl_eHdbVG/Manifest.toml`
[07b341a0] ADCME v0.3.4
[621f4979] AbstractFFTs v0.5.0
[4fba245c] ArrayInterface v2.0.0
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[a74b3585] Blosc v0.5.1
[e1450e63] BufferedStreams v1.0.0
[631607c0] CMake v1.1.2
[d5fb7624] CMakeWrapper v0.2.3
[49dc2e85] Calculus v0.5.1
[3da002f7] ColorTypes v0.8.0
[5ae59095] Colors v0.9.6
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.6
[01453d9d] DiffEqDiffTools v1.5.0
[163ba53b] DiffResults v0.0.4
[b552c78f] DiffRules v0.1.0
[7a1cc6ca] FFTW v1.1.0
[1a297f60] FillArrays v0.8.2
[53c48c17] FixedPointNumbers v0.6.1
[f6369f11] ForwardDiff v0.10.7
[f67ccb44] HDF5 v0.12.5
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.0.3
[2ec943e9] Libz v1.0.0
[d3d80556] LineSearches v7.0.1
[23992714] MAT v0.5.1
[1914dd2f] MacroTools v0.5.2
[fdba3010] MathProgBase v0.7.7
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.5.0
[76087f3c] NLopt v0.5.1
[77ba4419] NaNMath v0.3.3
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[429524aa] Optim v0.19.5
[bac558e1] OrderedCollections v1.1.0
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.10
[85a6dd25] PositiveFactorizations v0.2.3
[438e738f] PyCall v1.91.2
[d330b81b] PyPlot v2.8.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v0.5.2
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.9.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[fd094767] Suppressor v0.1.1
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.1.3
[2a0f44e3] Base64 [`@stdlib/Base64`]
[ade2ca70] Dates [`@stdlib/Dates`]
[8bb1440f] DelimitedFiles [`@stdlib/DelimitedFiles`]
[8ba89e20] Distributed [`@stdlib/Distributed`]
[b77e0a4c] InteractiveUtils [`@stdlib/InteractiveUtils`]
[76f85450] LibGit2 [`@stdlib/LibGit2`]
[8f399da3] Libdl [`@stdlib/Libdl`]
[37e2e46d] LinearAlgebra [`@stdlib/LinearAlgebra`]
[56ddb016] Logging [`@stdlib/Logging`]
[d6f4376e] Markdown [`@stdlib/Markdown`]
[a63ad114] Mmap [`@stdlib/Mmap`]
[44cfe95a] Pkg [`@stdlib/Pkg`]
[de0858da] Printf [`@stdlib/Printf`]
[3fa0cd96] REPL [`@stdlib/REPL`]
[9a3f8284] Random [`@stdlib/Random`]
[ea8e919c] SHA [`@stdlib/SHA`]
[9e88b42a] Serialization [`@stdlib/Serialization`]
[1a1011a3] SharedArrays [`@stdlib/SharedArrays`]
[6462fe0b] Sockets [`@stdlib/Sockets`]
[2f01184e] SparseArrays [`@stdlib/SparseArrays`]
[10745b16] Statistics [`@stdlib/Statistics`]
[8dfed614] Test [`@stdlib/Test`]
[cf7118a7] UUIDs [`@stdlib/UUIDs`]
[4ec0a83e] Unicode [`@stdlib/Unicode`]
┌ Warning: Parsing command "tensorboard --logdir="$(sw.tdir)" --port $port &". Special characters "#{}()[]<>|&*?~;" should now be quoted in commands
│ caller = #shell_parse#350(::String, ::typeof(Base.shell_parse), ::String, ::Bool) at shell.jl:107
└ @ Base ./shell.jl:107
WARNING: Method definition size(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:806 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:130.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition length(PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/PyCall.jl:805 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:153.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition lastindex(PyCall.PyObject) in module PyCall at deprecated.jl:65 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/variable.jl:313.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition *(PyCall.PyObject, PyCall.PyObject) in module PyCall at /root/.julia/packages/PyCall/ttONZ/src/pyoperators.jl:11 overwritten in module ADCME at /root/.julia/packages/ADCME/PahXg/src/ops.jl:66.
** incremental compilation may be fatally broken for this module **
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = (::ADCME.var"#95#96"{PyObject})(::Int64) at none:0
└ @ ADCME ./none:0
2019-12-02 21:03:36.452127: W tensorflow/compiler/jit/mark_for_compilation_pass.cc:1412] (One-time warning): Not using XLA:CPU for cluster because envvar TF_XLA_FLAGS=--tf_xla_cpu_global_jit was not set. If you want XLA:CPU, either set that envvar, or use experimental_jit_scope to enable XLA:CPU. To confirm that XLA is active, pass --vmodule=xla_compilation_cache=1 (as a proper command-line flag, not via TF_XLA_FLAGS) or set the envvar XLA_FLAGS=--xla_hlo_profile.
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor) at sparse.jl:115
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:115
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = size(::SparseTensor, ::Int64) at sparse.jl:119
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:119
Test Summary: | Pass Total
sparse_constructor | 7 7
Test Summary: | Pass Total
sparse_arithmetic | 4 4
Test Summary: | Pass Total
sparse_adjoint | 1 1
Test Summary: | Pass Total
sparse_mul | 6 6
Test Summary: | Pass Total
sparse_vcat_hcat | 2 2
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
Test threw exception
Expression: run(sess, B[2:3, 2:3]) ≈ B1[2:3, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[7] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:66
[9] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
Test threw exception
Expression: run(sess, B[2:3, :]) ≈ B1[2:3, :]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[7] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::UnitRange{Int64}, ::Colon) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:67
[9] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:202
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:202
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at sparse.jl:203
└ @ ADCME ~/.julia/packages/ADCME/PahXg/src/sparse.jl:203
[ Info: Lib SparseIndexing exists in registery but was not initialized. Compiling...
-- The C compiler identification is GNU 5.2.0
-- The CXX compiler identification is GNU 5.2.0
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc
-- Check for working C compiler: /root/.julia/conda/3/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++
-- Check for working CXX compiler: /root/.julia/conda/3/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Python path=
-- Configuring done
-- Generating done
-- Build files have been written to: /root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/build
Scanning dependencies of target SparseIndexing
[ 50%] Building CXX object CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o
/root/.julia/packages/ADCME/PahXg/deps/CustomOps/SparseIndexing/SparseIndexing.cpp:1:49: fatal error: tensorflow/core/framework/op_kernel.h: No such file or directory
compilation terminated.
make[2]: *** [CMakeFiles/SparseIndexing.dir/build.make:63: CMakeFiles/SparseIndexing.dir/SparseIndexing.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/SparseIndexing.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
sparse_indexing: Error During Test at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
Test threw exception
Expression: run(sess, B[:, 2:3]) ≈ B1[:, 2:3]
Compilation error: ProcessFailedException(Base.Process[Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2))])
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:217
[3] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[4] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[5] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[6] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[7] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
caused by [exception 1]
failed process: Process(`/root/.julia/conda/3/bin/make -j`, ProcessExited(2)) [2]
Stacktrace:
[1] pipeline_error at ./process.jl:525 [inlined]
[2] #run#565(::Bool, ::typeof(run), ::Cmd) at ./process.jl:440
[3] run at ./process.jl:438 [inlined]
[4] compile(::String) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:215
[5] #load_system_op#259(::Bool, ::Bool, ::typeof(load_system_op), ::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:184
[6] load_system_op(::String, ::String, ::String, ::Bool) at /root/.julia/packages/ADCME/PahXg/src/extra.jl:173
[7] getindex(::SparseTensor, ::Colon, ::UnitRange{Int64}) at /root/.julia/packages/ADCME/PahXg/src/sparse.jl:204
[8] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:68
[9] top-level scope at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Test/src/Test.jl:1107
[10] top-level scope at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:64
Test Summary: | Error Total
sparse_indexing | 3 3
ERROR: LoadError: LoadError: Some tests did not pass: 0 passed, 0 failed, 3 errored, 0 broken.
in expression starting at /root/.julia/packages/ADCME/PahXg/test/sparse.jl:63
in expression starting at /root/.julia/packages/ADCME/PahXg/test/runtests.jl:12
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:516: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:517: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:518: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:519: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:520: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorflow/python/framework/dtypes.py:525: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:541: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint8 = np.dtype([("qint8", np.int8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:542: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint8 = np.dtype([("quint8", np.uint8, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:543: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint16 = np.dtype([("qint16", np.int16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:544: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_quint16 = np.dtype([("quint16", np.uint16, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:545: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
_np_qint32 = np.dtype([("qint32", np.int32, 1)])
/root/.julia/conda/3/lib/python3.7/site-packages/tensorboard/compat/tensorflow_stub/dtypes.py:550: FutureWarning: Passing (type, 1) or '1type' as a synonym of type is deprecated; in a future version of numpy, it will be understood as (type, (1,)) / '(1,)type'.
np_resource = np.dtype([("resource", np.ubyte, 1)])
ERROR: Package ADCME errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Types.jl:113
[2] #test#131(::Bool, ::Nothing, ::Cmd, ::Cmd, ::typeof(Pkg.Operations.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1370
[3] #test at ./none:0 [inlined]
[4] #test#62(::Bool, ::Nothing, ::Cmd, ::Cmd, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:253
[5] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:239
[6] #test#61 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[7] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:233 [inlined]
[8] #test#60 at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[9] test at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:232 [inlined]
[10] #test#59(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.test), ::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[11] test(::String) at /workspace/srcdir/julia/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:231
[12] top-level scope at none:10